Analysis of interatomic Contacts of Structural Units in PDB entry:
8HFB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HFB entry

There are 2 chains in PDB entry 8HFB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4PRO 337
B
 LEU 4LYS 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8HFB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 43Right-handed alpha
Helix 2
AA2
A
123 125Right-handed 310
Helix 3
AA3
A
126 131Right-handed alpha
Helix 4
AA4
A
148 156Right-handed alpha
Helix 5
AA5
A
210 214Right-handed 310
Helix 6
AA6
A
295 303Right-handed alpha
Helix 7
AA7
B
38 43Right-handed alpha
Helix 8
AA8
B
123 125Right-handed 310
Helix 9
AA9
B
126 131Right-handed alpha
Helix 10
AB1
B
148 159Right-handed alpha
Helix 11
AB2
B
210 215Right-handed alpha
Helix 12
AB3
B
295 300Right-handed alpha
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There are 8 sheets in PDB entry 8HFB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
266 269anti-parallel
Strand 3
A
240 247anti-parallel
Strand 4
A
284 291anti-parallel
Strand 5
A
219 225anti-parallel
Strand 6
A
203 209anti-parallel
Strand 7
A
196 200anti-parallel
Strand 8
A
304 305anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
24 28anti-parallel
Strand 3
A
31 37anti-parallel
Strand 4
A
46 53anti-parallel
Strand 5
A
112 119anti-parallel
Strand 6
A
69 75anti-parallel
Strand 7
A
94 97anti-parallel
Strand 8
A
188 190anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
58 63anti-parallel
Strand 3
A
103 107anti-parallel
Strand 4
A
78 82anti-parallel
Strand 5
A
85 89anti-parallel
Strand 6
A
174 175parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 261first strand
Strand 2
A
250 254anti-parallel
Strand 3
A
275 279anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
266 269anti-parallel
Strand 3
B
240 247anti-parallel
Strand 4
B
284 291anti-parallel
Strand 5
B
219 225anti-parallel
Strand 6
B
203 209anti-parallel
Strand 7
B
196 200anti-parallel
Strand 8
B
304 305anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
24 28anti-parallel
Strand 3
B
31 37anti-parallel
Strand 4
B
46 53anti-parallel
Strand 5
B
112 119anti-parallel
Strand 6
B
69 75anti-parallel
Strand 7
B
94 97anti-parallel
Strand 8
B
188 190anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
58 63anti-parallel
Strand 3
B
103 107anti-parallel
Strand 4
B
78 82anti-parallel
Strand 5
B
85 89anti-parallel
Strand 6
B
174 175parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 261first strand
Strand 2
B
250 254anti-parallel
Strand 3
B
275 279anti-parallel
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