Analysis of interatomic Contacts of Structural Units in PDB entry:
8HFS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HFS entry

There are 8 chains in PDB entry 8HFS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
Y
 MET 1GLY 249
Z
 LYS 5MET 307
B
 GLU 7PHE 98
A
 LYS 1HIS 54
E
 MET 1SER 248
F
 VAL 6MET 307
C
 MET 1SER 248
D
 VAL 6MET 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 8HFS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
Y
4 25Right-handed alpha
Helix 2
AA2
Y
31 43Right-handed alpha
Helix 3
AA3
Y
45 61Right-handed alpha
Helix 4
AA4
Y
73 88Right-handed alpha
Helix 5
AA5
Y
93 135Right-handed alpha
Helix 6
AA6
Y
137 166Right-handed alpha
Helix 7
AA7
Y
167 178Right-handed alpha
Helix 8
AA8
Y
179 204Right-handed alpha
Helix 9
AA9
Y
210 221Right-handed alpha
Helix 10
AB1
Y
227 249Right-handed alpha
Helix 11
AB2
Z
9 20Right-handed alpha
Helix 12
AB3
Z
21 23Right-handed 310
Helix 13
AB4
Z
34 49Right-handed alpha
Helix 14
AB5
Z
52 63Right-handed alpha
Helix 15
AB6
Z
73 89Right-handed alpha
Helix 16
AB7
Z
96 118Right-handed alpha
Helix 17
AB8
Z
120 132Right-handed alpha
Helix 18
AB9
Z
138 167Right-handed alpha
Helix 19
AC1
Z
170 175Right-handed alpha
Helix 20
AC2
Z
178 202Right-handed alpha
Helix 21
AC3
Z
233 246Right-handed alpha
Helix 22
AC4
Z
257 265Right-handed alpha
Helix 23
AC5
Z
267 283Right-handed alpha
Helix 24
AC6
Z
286 304Right-handed alpha
Helix 25
AC7
B
8 23Right-handed alpha
Helix 26
AC8
B
25 41Right-handed alpha
Helix 27
AC9
B
44 55Right-handed alpha
Helix 28
AD1
B
56 62Right-handed alpha
Helix 29
AD2
B
66 68Right-handed 310
Helix 30
AD3
B
69 77Right-handed alpha
Helix 31
AD4
B
85 93Right-handed alpha
Helix 32
AD5
A
29 48Right-handed alpha
Helix 33
AD6
E
5 25Right-handed alpha
Helix 34
AD7
E
31 43Right-handed alpha
Helix 35
AD8
E
45 58Right-handed alpha
Helix 36
AD9
E
73 88Right-handed alpha
Helix 37
AE1
E
94 100Right-handed alpha
Helix 38
AE2
E
100 134Right-handed alpha
Helix 39
AE3
E
137 166Right-handed alpha
Helix 40
AE4
E
167 178Right-handed alpha
Helix 41
AE5
E
179 193Right-handed alpha
Helix 42
AE6
E
193 205Right-handed alpha
Helix 43
AE7
E
210 220Right-handed alpha
Helix 44
AE8
E
227 247Right-handed alpha
Helix 45
AE9
F
9 21Right-handed alpha
Helix 46
AF1
F
34 49Right-handed alpha
Helix 47
AF2
F
52 62Right-handed alpha
Helix 48
AF3
F
73 90Right-handed alpha
Helix 49
AF4
F
96 105Right-handed alpha
Helix 50
AF5
F
105 119Right-handed alpha
Helix 51
AF6
F
120 132Right-handed alpha
Helix 52
AF7
F
138 167Right-handed alpha
Helix 53
AF8
F
169 174Right-handed alpha
Helix 54
AF9
F
177 201Right-handed alpha
Helix 55
AG1
F
233 246Right-handed alpha
Helix 56
AG2
F
257 265Right-handed alpha
Helix 57
AG3
F
267 283Right-handed alpha
Helix 58
AG4
F
286 304Right-handed alpha
Helix 59
AG5
C
6 25Right-handed alpha
Helix 60
AG6
C
31 43Right-handed alpha
Helix 61
AG7
C
47 61Right-handed alpha
Helix 62
AG8
C
73 88Right-handed alpha
Helix 63
AG9
C
94 99Right-handed alpha
Helix 64
AH1
C
100 134Right-handed alpha
Helix 65
AH2
C
139 166Right-handed alpha
Helix 66
AH3
C
167 178Right-handed alpha
Helix 67
AH4
C
179 193Right-handed alpha
Helix 68
AH5
C
193 205Right-handed alpha
Helix 69
AH6
C
210 221Right-handed alpha
Helix 70
AH7
C
227 247Right-handed alpha
Helix 71
AH8
D
9 20Right-handed alpha
Helix 72
AH9
D
21 23Right-handed 310
Helix 73
AI1
D
34 49Right-handed alpha
Helix 74
AI2
D
52 61Right-handed alpha
Helix 75
AI3
D
73 90Right-handed alpha
Helix 76
AI4
D
96 105Right-handed alpha
Helix 77
AI5
D
106 118Right-handed alpha
Helix 78
AI6
D
121 132Right-handed alpha
Helix 79
AI7
D
139 167Right-handed alpha
Helix 80
AI8
D
177 201Right-handed alpha
Helix 81
AI9
D
234 246Right-handed alpha
Helix 82
AJ1
D
257 265Right-handed alpha
Helix 83
AJ2
D
267 283Right-handed alpha
Helix 84
AJ3
D
286 304Right-handed alpha
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There are 4 sheets in PDB entry 8HFS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Z
212 214first strand
Strand 2
Z
255 256anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 7first strand
Strand 2
A
12 16anti-parallel
Strand 3
A
22 25anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
212 217first strand
Strand 2
F
252 256anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
212 217first strand
Strand 2
D
252 256anti-parallel
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