Analysis of interatomic Contacts of Structural Units in PDB entry:
8HG5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HG5 entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 4 chains in PDB entry 8HG5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
P
 ASP 33TYR 233
Q
 ARG 29ARG 30
Q
 LYS 32TYR 253
R
 ASP 33TYR 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8HG5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
P
55 82Right-handed alpha
Helix 2
AA2
P
88 93Right-handed alpha
Helix 3
AA3
P
121 142Right-handed alpha
Helix 4
AA4
P
167 172Right-handed alpha
Helix 5
AA5
P
173 202Right-handed alpha
Helix 6
AA6
P
205 216Right-handed alpha
Helix 7
AA7
P
221 229Right-handed alpha
Helix 8
AA8
Q
75 104Right-handed alpha
Helix 9
AA9
Q
106 113Right-handed 310
Helix 10
AB1
Q
120 124Right-handed 310
Helix 11
AB2
Q
142 162Right-handed alpha
Helix 12
AB3
Q
187 192Right-handed alpha
Helix 13
AB4
Q
193 223Right-handed alpha
Helix 14
AB5
Q
225 236Right-handed alpha
Helix 15
AB6
Q
241 248Right-handed alpha
Helix 16
AB7
Q
249 252Right-handed 310
Helix 17
AB8
R
54 83Right-handed alpha
Helix 18
AB9
R
85 87Right-handed 310
Helix 19
AC1
R
88 93Right-handed alpha
Helix 20
AC2
R
100 105Right-handed alpha
Helix 21
AC3
R
114 118Right-handed 310
Helix 22
AC4
R
121 142Right-handed alpha
Helix 23
AC5
R
173 202Right-handed alpha
Helix 24
AC6
R
205 216Right-handed alpha
Helix 25
AC7
R
221 229Right-handed alpha
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There are no sheets in PDB entry 8HG5
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