Analysis of interatomic Contacts of Structural Units in PDB entry:
8HG9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HG9 entry

There are 2 chains in PDB entry 8HG9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4LYS 410
B
 VAL 5LYS 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 8HG9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 13Right-handed alpha
Helix 2
AA2
A
16 22Right-handed alpha
Helix 3
AA3
A
23 34Right-handed alpha
Helix 4
AA4
A
49 59Right-handed alpha
Helix 5
AA5
A
93 106Right-handed alpha
Helix 6
AA6
A
109 131Right-handed alpha
Helix 7
AA7
A
139 143Right-handed alpha
Helix 8
AA8
A
145 157Right-handed alpha
Helix 9
AA9
A
159 161Right-handed 310
Helix 10
AB1
A
162 175Right-handed alpha
Helix 11
AB2
A
183 209Right-handed alpha
Helix 12
AB3
A
214 222Right-handed alpha
Helix 13
AB4
A
230 246Right-handed alpha
Helix 14
AB5
A
246 263Right-handed alpha
Helix 15
AB6
A
266 274Right-handed alpha
Helix 16
AB7
A
277 289Right-handed alpha
Helix 17
AB8
A
320 324Right-handed alpha
Helix 18
AB9
A
342 346Right-handed 310
Helix 19
AC1
A
351 355Right-handed 310
Helix 20
AC2
A
358 377Right-handed alpha
Helix 21
AC3
A
388 390Right-handed 310
Helix 22
AC4
B
8 13Right-handed alpha
Helix 23
AC5
B
16 22Right-handed alpha
Helix 24
AC6
B
23 34Right-handed alpha
Helix 25
AC7
B
49 59Right-handed alpha
Helix 26
AC8
B
93 106Right-handed alpha
Helix 27
AC9
B
109 131Right-handed alpha
Helix 28
AD1
B
139 143Right-handed alpha
Helix 29
AD2
B
145 157Right-handed alpha
Helix 30
AD3
B
159 161Right-handed 310
Helix 31
AD4
B
162 175Right-handed alpha
Helix 32
AD5
B
185 209Right-handed alpha
Helix 33
AD6
B
214 222Right-handed alpha
Helix 34
AD7
B
230 246Right-handed alpha
Helix 35
AD8
B
246 263Right-handed alpha
Helix 36
AD9
B
266 274Right-handed alpha
Helix 37
AE1
B
277 289Right-handed alpha
Helix 38
AE2
B
320 324Right-handed alpha
Helix 39
AE3
B
342 346Right-handed 310
Helix 40
AE4
B
351 355Right-handed 310
Helix 41
AE5
B
358 377Right-handed alpha
Helix 42
AE6
B
388 390Right-handed 310
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There are 7 sheets in PDB entry 8HG9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
44 47anti-parallel
Strand 3
A
315 319parallel
Strand 4
A
294 299anti-parallel
Strand 5
A
63 64anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
405 409anti-parallel
Strand 3
A
379 381anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
227 228anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 394first strand
Strand 2
A
399 401anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 39first strand
Strand 2
B
44 47anti-parallel
Strand 3
B
315 319parallel
Strand 4
B
294 299anti-parallel
Strand 5
B
63 64anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 138first strand
Strand 2
B
405 409anti-parallel
Strand 3
B
379 381anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
392 394first strand
Strand 2
B
399 401anti-parallel
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