Analysis of interatomic Contacts of Structural Units in PDB entry:
8HGT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HGT entry

There is 1 chain in PDB entry 8HGT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 47SER 474
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 8HGT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 67Right-handed 310
Helix 2
AA2
A
68 72Right-handed 310
Helix 3
AA3
A
84 96Right-handed alpha
Helix 4
AA4
A
114 124Right-handed alpha
Helix 5
AA5
A
147 151Right-handed 310
Helix 6
AA6
A
154 164Right-handed alpha
Helix 7
AA7
A
165 167Right-handed 310
Helix 8
AA8
A
168 175Right-handed alpha
Helix 9
AA9
A
175 190Right-handed alpha
Helix 10
AB1
A
198 202Right-handed alpha
Helix 11
AB2
A
202 216Right-handed alpha
Helix 12
AB3
A
218 220Right-handed 310
Helix 13
AB4
A
221 234Right-handed alpha
Helix 14
AB5
A
235 240Right-handed alpha
Helix 15
AB6
A
245 273Right-handed alpha
Helix 16
AB7
A
280 286Right-handed alpha
Helix 17
AB8
A
293 296Right-handed 310
Helix 18
AB9
A
297 330Right-handed alpha
Helix 19
AC1
A
331 340Right-handed alpha
Helix 20
AC2
A
343 356Right-handed alpha
Helix 21
AC3
A
385 390Right-handed alpha
Helix 22
AC4
A
408 412Right-handed 310
Helix 23
AC5
A
424 442Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 8HGT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 101first strand
Strand 2
A
109 112anti-parallel
Strand 3
A
381 384parallel
Strand 4
A
361 365anti-parallel
Strand 5
A
128 129anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
467 472anti-parallel
Strand 3
A
443 448anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
A
374 376anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 454first strand
Strand 2
A
463 465anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il