Analysis of interatomic Contacts of Structural Units in PDB entry:
8HGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HGW entry

There are 4 chains in PDB entry 8HGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 24LEU 311
B
 PHE 24LEU 311
C
 PHE 24LEU 311
D
 PHE 24LEU 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8HGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 66Right-handed 310
Helix 2
AA2
A
67 72Right-handed alpha
Helix 3
AA3
A
94 98Right-handed 310
Helix 4
AA4
A
99 114Right-handed alpha
Helix 5
AA5
A
125 138Right-handed alpha
Helix 6
AA6
A
163 172Right-handed alpha
Helix 7
AA7
A
176 189Right-handed alpha
Helix 8
AA8
A
196 209Right-handed alpha
Helix 9
AA9
A
209 223Right-handed alpha
Helix 10
AB1
A
226 245Right-handed alpha
Helix 11
AB2
A
263 276Right-handed alpha
Helix 12
AB3
A
292 297Right-handed alpha
Helix 13
AB4
A
297 310Right-handed alpha
Helix 14
AB5
B
61 65Right-handed 310
Helix 15
AB6
B
66 72Right-handed alpha
Helix 16
AB7
B
94 98Right-handed 310
Helix 17
AB8
B
99 114Right-handed alpha
Helix 18
AB9
B
125 138Right-handed alpha
Helix 19
AC1
B
163 172Right-handed alpha
Helix 20
AC2
B
178 189Right-handed alpha
Helix 21
AC3
B
196 209Right-handed alpha
Helix 22
AC4
B
209 223Right-handed alpha
Helix 23
AC5
B
226 243Right-handed alpha
Helix 24
AC6
B
263 276Right-handed alpha
Helix 25
AC7
B
292 297Right-handed alpha
Helix 26
AC8
B
297 310Right-handed alpha
Helix 27
AC9
C
61 65Right-handed 310
Helix 28
AD1
C
66 72Right-handed alpha
Helix 29
AD2
C
94 98Right-handed 310
Helix 30
AD3
C
99 114Right-handed alpha
Helix 31
AD4
C
125 138Right-handed alpha
Helix 32
AD5
C
163 172Right-handed alpha
Helix 33
AD6
C
178 189Right-handed alpha
Helix 34
AD7
C
196 209Right-handed alpha
Helix 35
AD8
C
209 223Right-handed alpha
Helix 36
AD9
C
226 245Right-handed alpha
Helix 37
AE1
C
263 278Right-handed alpha
Helix 38
AE2
C
292 297Right-handed alpha
Helix 39
AE3
C
297 310Right-handed alpha
Helix 40
AE4
D
61 66Right-handed 310
Helix 41
AE5
D
67 72Right-handed alpha
Helix 42
AE6
D
94 98Right-handed 310
Helix 43
AE7
D
99 114Right-handed alpha
Helix 44
AE8
D
125 138Right-handed alpha
Helix 45
AE9
D
163 172Right-handed alpha
Helix 46
AF1
D
176 189Right-handed alpha
Helix 47
AF2
D
196 209Right-handed alpha
Helix 48
AF3
D
209 223Right-handed alpha
Helix 49
AF4
D
226 245Right-handed alpha
Helix 50
AF5
D
263 278Right-handed alpha
Helix 51
AF6
D
292 297Right-handed alpha
Helix 52
AF7
D
297 310Right-handed alpha
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There are 3 sheets in PDB entry 8HGW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 29first strand
Strand 2
A
32 38anti-parallel
Strand 3
A
77 81anti-parallel
Strand 4
A
45 49parallel
Strand 5
A
119 124parallel
Strand 6
A
142 148parallel
Strand 7
A
251 256parallel
Strand 8
A
281 286parallel
Strand 9
D
281 286anti-parallel
Strand 10
D
251 256parallel
Strand 11
D
142 148parallel
Strand 12
D
119 124parallel
Strand 13
D
45 49parallel
Strand 14
D
77 81parallel
Strand 15
D
32 38anti-parallel
Strand 16
D
25 29anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 29first strand
Strand 2
B
32 38anti-parallel
Strand 3
B
77 81anti-parallel
Strand 4
B
45 49parallel
Strand 5
B
119 124parallel
Strand 6
B
142 148parallel
Strand 7
B
251 256parallel
Strand 8
B
281 286parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 29first strand
Strand 2
C
32 38anti-parallel
Strand 3
C
77 81anti-parallel
Strand 4
C
45 49parallel
Strand 5
C
119 124parallel
Strand 6
C
142 148parallel
Strand 7
C
251 256parallel
Strand 8
C
281 286parallel
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