Analysis of interatomic Contacts of Structural Units in PDB entry:
8HI1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HI1 entry

There are 7 chains in PDB entry 8HI1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 23	GLU 311
B	LYS 4	ASP 281
C	VAL 22	GLY 306
D	LYS 4	ASP 281
E	PRO 2	SER 93
F	MET 1	ASN 92
G	A 1	A 1

There are 43 helices in PDB entry 8HI1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	68	77	Right-handed alpha
Helix 2	AA2	A	86	89	Right-handed 310
Helix 3	AA3	A	97	101	Right-handed 310
Helix 4	AA4	A	102	113	Right-handed alpha
Helix 5	AA5	A	119	128	Right-handed alpha
Helix 6	AA6	A	139	163	Right-handed alpha
Helix 7	AA7	A	180	205	Right-handed alpha
Helix 8	AA8	A	219	228	Right-handed alpha
Helix 9	AA9	A	229	234	Right-handed alpha
Helix 10	AB1	A	234	244	Right-handed alpha
Helix 11	AB2	A	250	265	Right-handed alpha
Helix 12	AB3	A	267	280	Right-handed alpha
Helix 13	AB4	A	283	287	Right-handed 310
Helix 14	AB5	B	68	76	Right-handed alpha
Helix 15	AB6	B	103	114	Right-handed alpha
Helix 16	AB7	B	115	130	Right-handed alpha
Helix 17	AB8	B	182	203	Right-handed alpha
Helix 18	AB9	B	219	243	Right-handed alpha
Helix 19	AC1	B	254	267	Right-handed alpha
Helix 20	AC2	B	267	281	Right-handed alpha
Helix 21	AC3	C	68	75	Right-handed alpha
Helix 22	AC4	C	76	78	Right-handed 310
Helix 23	AC5	C	97	101	Right-handed 310
Helix 24	AC6	C	102	114	Right-handed alpha
Helix 25	AC7	C	116	121	Right-handed alpha
Helix 26	AC8	C	124	129	Right-handed alpha
Helix 27	AC9	C	139	162	Right-handed alpha
Helix 28	AD1	C	175	179	Right-handed 310
Helix 29	AD2	C	180	205	Right-handed alpha
Helix 30	AD3	C	219	234	Right-handed alpha
Helix 31	AD4	C	234	244	Right-handed alpha
Helix 32	AD5	C	250	263	Right-handed alpha
Helix 33	AD6	C	268	278	Right-handed alpha
Helix 34	AD7	D	68	75	Right-handed alpha
Helix 35	AD8	D	102	114	Right-handed alpha
Helix 36	AD9	D	115	129	Right-handed alpha
Helix 37	AE1	D	141	152	Right-handed alpha
Helix 38	AE2	D	182	205	Right-handed alpha
Helix 39	AE3	D	219	244	Right-handed alpha
Helix 40	AE4	D	254	267	Right-handed alpha
Helix 41	AE5	D	267	280	Right-handed alpha
Helix 42	AE6	E	36	50	Right-handed alpha
Helix 43	AE7	F	36	48	Right-handed alpha

There are 17 sheets in PDB entry 8HI1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	27	first strand
Strand 2	A	59	60	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	31	first strand
Strand 2	A	64	66	parallel
Strand 3	B	66	67	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	35	first strand
Strand 2	A	38	40	anti-parallel
Strand 3	A	49	51	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	A	91	93	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	27	first strand
Strand 2	B	58	60	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	34	first strand
Strand 2	B	39	42	anti-parallel
Strand 3	B	47	49	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	92	93	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	35	first strand
Strand 2	C	38	42	anti-parallel
Strand 3	C	49	51	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	82	83	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	67	first strand
Strand 2	D	65	67	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	27	first strand
Strand 2	D	58	60	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	35	first strand
Strand 2	D	38	42	anti-parallel
Strand 3	D	47	48	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	80	83	first strand
Strand 2	D	90	94	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	24	27	first strand
Strand 2	E	30	34	anti-parallel
Strand 3	E	3	9	anti-parallel
Strand 4	E	55	61	anti-parallel
Strand 5	E	68	73	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	78	82	first strand
Strand 2	E	85	89	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	24	27	first strand
Strand 2	F	30	34	anti-parallel
Strand 3	F	3	9	anti-parallel
Strand 4	F	55	61	anti-parallel
Strand 5	F	68	73	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	79	82	first strand
Strand 2	F	85	88	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HI1

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HI1