Analysis of interatomic Contacts of Structural Units in PDB entry:
8HI2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HI2 entry

There are 3 chains in PDB entry 8HI2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 75ALA 293
B
 ILE 31ARG 249
C
 GLY 1ASP 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8HI2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
75 78Right-handed 310
Helix 2
AA2
A
79 85Right-handed alpha
Helix 3
AA3
A
112 116Right-handed 310
Helix 4
AA4
A
119 124Right-handed alpha
Helix 5
AA5
B
35 37Right-handed 310
Helix 6
AA6
B
83 88Right-handed alpha
Helix 7
AA7
B
89 98Right-handed alpha
Helix 8
AA8
B
147 152Right-handed alpha
Helix 9
AA9
B
171 178Right-handed 310
Helix 10
AB1
C
42 48Right-handed alpha
Helix 11
AB2
C
61 70Right-handed 310
Helix 12
AB3
C
94 98Right-handed 310
Helix 13
AB4
C
99 105Right-handed alpha
Helix 14
AB5
C
145 152Right-handed alpha
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There are 10 sheets in PDB entry 8HI2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 95first strand
Strand 2
A
247 263anti-parallel
Strand 3
A
126 140anti-parallel
Strand 4
A
188 192anti-parallel
Strand 5
C
22 23parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
126 140anti-parallel
Strand 3
A
247 263anti-parallel
Strand 4
C
39 40anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 110first strand
Strand 2
A
232 237anti-parallel
Strand 3
A
150 156anti-parallel
Strand 4
A
178 182anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
190 195parallel
Strand 3
B
99 112anti-parallel
Strand 4
B
232 238anti-parallel
Strand 5
B
69 71anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
232 238anti-parallel
Strand 3
B
99 112anti-parallel
Strand 4
B
241 248anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
78 82anti-parallel
Strand 3
B
212 223anti-parallel
Strand 4
B
119 128anti-parallel
Strand 5
B
180 184anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
211 220anti-parallel
Strand 3
C
71 74anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
211 220anti-parallel
Strand 3
C
115 122anti-parallel
Strand 4
C
164 167anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 87first strand
Strand 2
C
193 197anti-parallel
Strand 3
C
130 136anti-parallel
Strand 4
C
153 158anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
172 173first strand
Strand 2
C
108 113anti-parallel
Strand 3
C
225 229anti-parallel
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