Analysis of interatomic Contacts of Structural Units in PDB entry:
8HI4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HI4 entry

There are 2 chains in PDB entry 8HI4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 19	PRO 1208
B	LEU 13	LEU 1209

There are 91 helices in PDB entry 8HI4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	30	Right-handed alpha
Helix 2	AA2	A	41	45	Right-handed 310
Helix 3	AA3	A	74	88	Right-handed alpha
Helix 4	AA4	A	120	124	Right-handed 310
Helix 5	AA5	A	131	138	Right-handed alpha
Helix 6	AA6	A	140	150	Right-handed alpha
Helix 7	AA7	A	175	179	Right-handed 310
Helix 8	AA8	A	184	197	Right-handed alpha
Helix 9	AA9	A	213	228	Right-handed alpha
Helix 10	AB1	A	232	241	Right-handed alpha
Helix 11	AB2	A	259	272	Right-handed alpha
Helix 12	AB3	A	322	335	Right-handed alpha
Helix 13	AB4	A	349	359	Right-handed alpha
Helix 14	AB5	A	390	403	Right-handed alpha
Helix 15	AB6	A	430	438	Right-handed alpha
Helix 16	AB7	A	439	456	Right-handed alpha
Helix 17	AB8	A	477	502	Right-handed alpha
Helix 18	AB9	A	504	509	Right-handed alpha
Helix 19	AC1	A	531	543	Right-handed alpha
Helix 20	AC2	A	560	566	Right-handed alpha
Helix 21	AC3	A	572	578	Right-handed alpha
Helix 22	AC4	A	595	608	Right-handed alpha
Helix 23	AC5	A	617	632	Right-handed alpha
Helix 24	AC6	A	660	669	Right-handed alpha
Helix 25	AC7	A	692	704	Right-handed alpha
Helix 26	AC8	A	704	722	Right-handed alpha
Helix 27	AC9	A	746	759	Right-handed alpha
Helix 28	AD1	A	763	768	Right-handed alpha
Helix 29	AD2	A	795	822	Right-handed alpha
Helix 30	AD3	A	829	834	Right-handed alpha
Helix 31	AD4	A	848	861	Right-handed alpha
Helix 32	AD5	A	874	888	Right-handed alpha
Helix 33	AD6	A	909	924	Right-handed alpha
Helix 34	AD7	A	935	947	Right-handed alpha
Helix 35	AD8	A	983	987	Right-handed 310
Helix 36	AD9	A	998	1012	Right-handed alpha
Helix 37	AE1	A	1024	1036	Right-handed alpha
Helix 38	AE2	A	1037	1039	Right-handed 310
Helix 39	AE3	A	1052	1064	Right-handed alpha
Helix 40	AE4	A	1095	1107	Right-handed alpha
Helix 41	AE5	A	1107	1120	Right-handed alpha
Helix 42	AE6	A	1140	1165	Right-handed alpha
Helix 43	AE7	A	1191	1204	Right-handed alpha
Helix 44	AE8	B	20	26	Right-handed alpha
Helix 45	AE9	B	51	57	Right-handed alpha
Helix 46	AF1	B	74	78	Right-handed 310
Helix 47	AF2	B	92	96	Right-handed 310
Helix 48	AF3	B	120	124	Right-handed 310
Helix 49	AF4	B	131	149	Right-handed alpha
Helix 50	AF5	B	165	169	Right-handed 310
Helix 51	AF6	B	175	183	Right-handed alpha
Helix 52	AF7	B	184	197	Right-handed alpha
Helix 53	AF8	B	198	200	Right-handed 310
Helix 54	AF9	B	213	228	Right-handed alpha
Helix 55	AG1	B	232	241	Right-handed alpha
Helix 56	AG2	B	259	269	Right-handed alpha
Helix 57	AG3	B	270	278	Right-handed 310
Helix 58	AG4	B	322	336	Right-handed alpha
Helix 59	AG5	B	347	359	Right-handed alpha
Helix 60	AG6	B	387	402	Right-handed alpha
Helix 61	AG7	B	427	435	Right-handed alpha
Helix 62	AG8	B	438	456	Right-handed alpha
Helix 63	AG9	B	477	501	Right-handed alpha
Helix 64	AH1	B	508	512	Right-handed 310
Helix 65	AH2	B	531	546	Right-handed alpha
Helix 66	AH3	B	572	578	Right-handed alpha
Helix 67	AH4	B	595	608	Right-handed alpha
Helix 68	AH5	B	618	634	Right-handed alpha
Helix 69	AH6	B	657	669	Right-handed alpha
Helix 70	AH7	B	687	691	Right-handed 310
Helix 71	AH8	B	692	704	Right-handed alpha
Helix 72	AH9	B	704	720	Right-handed alpha
Helix 73	AI1	B	731	735	Right-handed 310
Helix 74	AI2	B	746	768	Right-handed alpha
Helix 75	AI3	B	796	821	Right-handed alpha
Helix 76	AI4	B	825	830	Right-handed alpha
Helix 77	AI5	B	832	836	Right-handed 310
Helix 78	AI6	B	837	845	Right-handed alpha
Helix 79	AI7	B	848	862	Right-handed alpha
Helix 80	AI8	B	866	870	Right-handed 310
Helix 81	AI9	B	876	889	Right-handed alpha
Helix 82	AJ1	B	909	926	Right-handed alpha
Helix 83	AJ2	B	935	947	Right-handed alpha
Helix 84	AJ3	B	998	1012	Right-handed alpha
Helix 85	AJ4	B	1024	1036	Right-handed alpha
Helix 86	AJ5	B	1052	1063	Right-handed alpha
Helix 87	AJ6	B	1095	1107	Right-handed alpha
Helix 88	AJ7	B	1107	1117	Right-handed alpha
Helix 89	AJ8	B	1138	1141	Right-handed 310
Helix 90	AJ9	B	1142	1165	Right-handed alpha
Helix 91	AK1	B	1191	1207	Right-handed alpha

There are 17 sheets in PDB entry 8HI4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	38	first strand
Strand 2	A	65	66	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	163	first strand
Strand 2	A	203	206	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	298	first strand
Strand 2	A	554	556	parallel
Strand 3	A	521	523	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	378	382	first strand
Strand 2	A	339	344	parallel
Strand 3	A	314	318	parallel
Strand 4	A	407	410	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	366	first strand
Strand 2	A	372	373	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	463	465	first strand
Strand 2	A	517	519	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	610	614	first strand
Strand 2	A	586	590	parallel
Strand 3	A	674	675	parallel
Strand 4	A	724	726	parallel
Strand 5	A	771	773	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	775	776	first strand
Strand 2	A	956	957	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	990	994	first strand
Strand 2	A	1017	1022	parallel
Strand 3	A	1046	1048	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1070	1071	first strand
Strand 2	A	1125	1129	parallel
Strand 3	A	1172	1175	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	163	first strand
Strand 2	B	202	207	parallel
Strand 3	B	282	284	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	314	319	first strand
Strand 2	B	339	344	parallel
Strand 3	B	379	382	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	463	464	first strand
Strand 2	B	517	518	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	521	523	first strand
Strand 2	B	554	556	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	646	647	first strand
Strand 2	B	610	614	parallel
Strand 3	B	586	590	parallel
Strand 4	B	674	677	parallel
Strand 5	B	724	729	parallel
Strand 6	B	771	776	parallel
Strand 7	B	956	957	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	990	994	first strand
Strand 2	B	1017	1022	parallel
Strand 3	B	1044	1048	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1071	1072	first strand
Strand 2	B	1126	1127	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HI4

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HI4