Analysis of interatomic Contacts of Structural Units in PDB entry:
8HI5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HI5 entry

There is 1 chain in PDB entry 8HI5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 573VAL 1229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8HI5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
573 579Right-handed alpha
Helix 2
AA2
A
594 607Right-handed alpha
Helix 3
AA3
A
617 635Right-handed alpha
Helix 4
AA4
A
639 642Right-handed 310
Helix 5
AA5
A
656 670Right-handed alpha
Helix 6
AA6
A
687 691Right-handed 310
Helix 7
AA7
A
692 704Right-handed alpha
Helix 8
AA8
A
704 722Right-handed alpha
Helix 9
AA9
A
731 735Right-handed 310
Helix 10
AB1
A
746 768Right-handed alpha
Helix 11
AB2
A
794 822Right-handed alpha
Helix 12
AB3
A
825 834Right-handed alpha
Helix 13
AB4
A
837 844Right-handed alpha
Helix 14
AB5
A
848 862Right-handed alpha
Helix 15
AB6
A
866 870Right-handed 310
Helix 16
AB7
A
874 888Right-handed alpha
Helix 17
AB8
A
892 896Right-handed 310
Helix 18
AB9
A
909 927Right-handed alpha
Helix 19
AC1
A
935 947Right-handed alpha
Helix 20
AC2
A
979 985Right-handed alpha
Helix 21
AC3
A
998 1012Right-handed alpha
Helix 22
AC4
A
1024 1035Right-handed alpha
Helix 23
AC5
A
1035 1041Right-handed alpha
Helix 24
AC6
A
1052 1064Right-handed alpha
Helix 25
AC7
A
1095 1107Right-handed alpha
Helix 26
AC8
A
1107 1118Right-handed alpha
Helix 27
AC9
A
1137 1165Right-handed alpha
Helix 28
AD1
A
1180 1184Right-handed 310
Helix 29
AD2
A
1187 1207Right-handed alpha
Helix 30
AD3
A
1215 1222Right-handed alpha
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There are 3 sheets in PDB entry 8HI5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
644 647first strand
Strand 2
A
610 614parallel
Strand 3
A
586 590parallel
Strand 4
A
674 677parallel
Strand 5
A
724 729parallel
Strand 6
A
771 776parallel
Strand 7
A
956 957parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
739 740first strand
Strand 2
A
969 970anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
972 973first strand
Strand 2
A
1226 1228parallel
Strand 3
A
1171 1175parallel
Strand 4
A
1124 1129parallel
Strand 5
A
1069 1072parallel
Strand 6
A
990 994parallel
Strand 7
A
1017 1022parallel
Strand 8
A
1044 1048parallel
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