Analysis of interatomic Contacts of Structural Units in PDB entry:
8HI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HI7 entry

There are 2 chains in PDB entry 8HI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 269
B
 MET 1ARG 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 8HI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
16 26Right-handed alpha
Helix 3
AA3
A
37 47Right-handed alpha
Helix 4
AA4
A
50 77Right-handed alpha
Helix 5
AA5
A
77 87Right-handed alpha
Helix 6
AA6
A
90 102Right-handed alpha
Helix 7
AA7
A
110 123Right-handed alpha
Helix 8
AA8
A
131 150Right-handed alpha
Helix 9
AA9
A
178 184Right-handed alpha
Helix 10
AB1
A
185 188Right-handed 310
Helix 11
AB2
A
217 227Right-handed alpha
Helix 12
AB3
A
233 239Right-handed alpha
Helix 13
AB4
A
249 262Right-handed alpha
Helix 14
AB5
B
54 66Right-handed alpha
Helix 15
AB6
B
82 85Right-handed 310
Helix 16
AB7
B
86 91Right-handed alpha
Helix 17
AB8
B
91 99Right-handed alpha
Helix 18
AB9
B
126 145Right-handed alpha
Helix 19
AC1
B
165 178Right-handed alpha
Helix 20
AC2
B
185 194Right-handed alpha
Helix 21
AC3
B
199 207Right-handed alpha
Helix 22
AC4
B
208 210Right-handed 310
Helix 23
AC5
B
236 248Right-handed alpha
Helix 24
AC6
B
275 293Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 8HI7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
265 266anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 173first strand
Strand 2
A
199 203anti-parallel
Strand 3
A
212 215anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 14first strand
Strand 2
B
33 37parallel
Strand 3
B
67 71parallel
Strand 4
B
104 107parallel
Strand 5
B
148 151parallel
Strand 6
B
180 184parallel
Strand 7
B
212 217parallel
Strand 8
B
254 257parallel
Strand 9
B
11 14parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il