Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 8HIA entry
There are 20 chains in PDB entry 8HIA
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
GLU 1 | GLN 23 |
B
|
GLU 1 | GLN 23 |
C
|
GLU 1 | GLN 23 |
D
|
GLU 1 | GLN 23 |
E
|
GLU 1 | GLN 23 |
F
|
GLU 1 | GLN 23 |
G
|
GLU 1 | GLN 23 |
H
|
GLU 1 | GLN 23 |
I
|
GLU 1 | GLN 23 |
J
|
GLU 1 | GLN 23 |
K
|
GLU 1 | GLN 23 |
L
|
GLU 1 | GLN 23 |
M
|
GLU 1 | GLN 23 |
N
|
GLU 1 | GLN 23 |
O
|
GLU 1 | GLN 23 |
P
|
GLU 1 | GLN 23 |
Q
|
GLU 1 | GLN 23 |
R
|
GLU 1 | GLN 23 |
S
|
GLU 1 | GLN 23 |
T
|
GLU 1 | GLN 23 |
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There are no helices in PDB entry
8HIA
There are
20 sheets in PDB entry 8HIA. Click on sheet of
interest to get list of strands forming it:
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
11,
12,
13,
14,
15,
16,
17,
18,
19,
20,
There are 1
strands in 1 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
A
| 10 |
19 | first strand |
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There are 1
strands in 2 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
B
| 10 |
19 | first strand |
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There are 1
strands in 3 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
C
| 14 |
19 | first strand |
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There are 1
strands in 4 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
D
| 14 |
19 | first strand |
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There are 1
strands in 5 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
E
| 10 |
19 | first strand |
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There are 1
strands in 6 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
F
| 10 |
19 | first strand |
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There are 1
strands in 7 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
G
| 14 |
19 | first strand |
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There are 1
strands in 8 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
H
| 14 |
19 | first strand |
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There are 1
strands in 9 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
I
| 10 |
19 | first strand |
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There are 1
strands in 10 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
J
| 10 |
19 | first strand |
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There are 1
strands in 11 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
K
| 14 |
19 | first strand |
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There are 1
strands in 12 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
L
| 14 |
19 | first strand |
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There are 1
strands in 13 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
M
| 10 |
19 | first strand |
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There are 1
strands in 14 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
N
| 14 |
19 | first strand |
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There are 1
strands in 15 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
O
| 14 |
19 | first strand |
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There are 1
strands in 16 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
P
| 14 |
19 | first strand |
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There are 1
strands in 17 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
Q
| 10 |
19 | first strand |
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There are 1
strands in 18 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
R
| 10 |
19 | first strand |
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There are 1
strands in 19 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
S
| 14 |
19 | first strand |
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There are 1
strands in 20 sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
| Strand 1 |
T
| 14 |
19 | first strand |
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Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il