Analysis of interatomic Contacts of Structural Units in PDB entry:
8HIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HIC entry

There is 1 chain in PDB entry 8HIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 37LEU 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8HIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 74Right-handed alpha
Helix 2
AA2
A
96 110Right-handed alpha
Helix 3
AA3
A
121 135Right-handed alpha
Helix 4
AA4
A
160 163Right-handed 310
Helix 5
AA5
A
164 175Right-handed alpha
Helix 6
AA6
A
190 208Right-handed alpha
Helix 7
AA7
A
224 235Right-handed alpha
Helix 8
AA8
A
248 260Right-handed alpha
Helix 9
AA9
A
263 266Right-handed 310
Helix 10
AB1
A
276 284Right-handed alpha
Helix 11
AB2
A
285 288Right-handed 310
Helix 12
AB3
A
303 318Right-handed alpha
Helix 13
AB4
A
324 345Right-handed alpha
Helix 14
AB5
A
348 357Right-handed alpha
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There are 4 sheets in PDB entry 8HIC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
82 92anti-parallel
Strand 3
A
39 47parallel
Strand 4
A
116 118parallel
Strand 5
A
139 141parallel
Strand 6
A
154 156parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 217first strand
Strand 2
A
183 188parallel
Strand 3
A
239 244parallel
Strand 4
A
268 272parallel
Strand 5
A
292 295parallel
Strand 6
A
381 385anti-parallel
Strand 7
A
391 396anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 363first strand
Strand 2
A
366 370anti-parallel
Strand 3
A
376 377anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 419first strand
Strand 2
A
426 430anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il