Analysis of interatomic Contacts of Structural Units in PDB entry:
8HIR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HIR entry

There are 4 chains in PDB entry 8HIR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 85	ALA 1205
B	ARG 85	ALA 1205
C	ARG 85	ALA 1205
D	ARG 85	ALA 1205

There are172 helices in PDB entry 8HIR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	90	95	Right-handed alpha
Helix 2	AA2	A	96	106	Right-handed alpha
Helix 3	AA3	A	108	136	Right-handed alpha
Helix 4	AA4	A	138	142	Right-handed 310
Helix 5	AA5	A	164	169	Right-handed alpha
Helix 6	AA6	A	174	198	Right-handed alpha
Helix 7	AA7	A	204	209	Right-handed alpha
Helix 8	AA8	A	209	225	Right-handed alpha
Helix 9	AA9	A	237	239	Right-handed 310
Helix 10	AB1	A	240	254	Right-handed alpha
Helix 11	AB2	A	267	293	Right-handed alpha
Helix 12	AB3	A	300	313	Right-handed alpha
Helix 13	AB4	A	324	354	Right-handed alpha
Helix 14	AB5	A	364	372	Right-handed alpha
Helix 15	AB6	A	382	394	Right-handed alpha
Helix 16	AB7	A	396	400	Right-handed 310
Helix 17	AB8	A	413	420	Right-handed alpha
Helix 18	AB9	A	438	445	Right-handed alpha
Helix 19	AC1	A	465	482	Right-handed alpha
Helix 20	AC2	A	493	498	Right-handed 310
Helix 21	AC3	A	509	518	Right-handed alpha
Helix 22	AC4	A	525	534	Right-handed alpha
Helix 23	AC5	A	547	557	Right-handed alpha
Helix 24	AC6	A	579	591	Right-handed alpha
Helix 25	AC7	A	629	633	Right-handed 310
Helix 26	AC8	A	775	780	Right-handed alpha
Helix 27	AC9	A	792	797	Right-handed alpha
Helix 28	AD1	A	811	823	Right-handed alpha
Helix 29	AD2	A	843	851	Right-handed alpha
Helix 30	AD3	A	865	873	Right-handed alpha
Helix 31	AD4	A	887	891	Right-handed 310
Helix 32	AD5	A	893	898	Right-handed alpha
Helix 33	AD6	A	898	912	Right-handed alpha
Helix 34	AD7	A	923	930	Right-handed 310
Helix 35	AD8	A	937	953	Right-handed alpha
Helix 36	AD9	A	961	966	Right-handed alpha
Helix 37	AE1	A	971	975	Right-handed 310
Helix 38	AE2	A	976	985	Right-handed alpha
Helix 39	AE3	A	987	996	Right-handed alpha
Helix 40	AE4	A	1013	1017	Right-handed 310
Helix 41	AE5	A	1021	1033	Right-handed alpha
Helix 42	AE6	A	1132	1142	Right-handed alpha
Helix 43	AE7	A	1144	1161	Right-handed alpha
Helix 44	AE8	B	90	95	Right-handed alpha
Helix 45	AE9	B	96	106	Right-handed alpha
Helix 46	AF1	B	108	136	Right-handed alpha
Helix 47	AF2	B	138	142	Right-handed 310
Helix 48	AF3	B	164	169	Right-handed alpha
Helix 49	AF4	B	174	198	Right-handed alpha
Helix 50	AF5	B	204	209	Right-handed alpha
Helix 51	AF6	B	209	225	Right-handed alpha
Helix 52	AF7	B	237	239	Right-handed 310
Helix 53	AF8	B	240	254	Right-handed alpha
Helix 54	AF9	B	267	293	Right-handed alpha
Helix 55	AG1	B	300	313	Right-handed alpha
Helix 56	AG2	B	324	354	Right-handed alpha
Helix 57	AG3	B	364	372	Right-handed alpha
Helix 58	AG4	B	382	394	Right-handed alpha
Helix 59	AG5	B	396	400	Right-handed 310
Helix 60	AG6	B	413	420	Right-handed alpha
Helix 61	AG7	B	438	445	Right-handed alpha
Helix 62	AG8	B	465	482	Right-handed alpha
Helix 63	AG9	B	493	498	Right-handed 310
Helix 64	AH1	B	509	518	Right-handed alpha
Helix 65	AH2	B	525	534	Right-handed alpha
Helix 66	AH3	B	547	557	Right-handed alpha
Helix 67	AH4	B	579	591	Right-handed alpha
Helix 68	AH5	B	629	633	Right-handed 310
Helix 69	AH6	B	775	780	Right-handed alpha
Helix 70	AH7	B	792	797	Right-handed alpha
Helix 71	AH8	B	811	823	Right-handed alpha
Helix 72	AH9	B	843	851	Right-handed alpha
Helix 73	AI1	B	865	873	Right-handed alpha
Helix 74	AI2	B	887	891	Right-handed 310
Helix 75	AI3	B	893	898	Right-handed alpha
Helix 76	AI4	B	898	912	Right-handed alpha
Helix 77	AI5	B	923	930	Right-handed 310
Helix 78	AI6	B	937	953	Right-handed alpha
Helix 79	AI7	B	961	966	Right-handed alpha
Helix 80	AI8	B	973	975	Right-handed 310
Helix 81	AI9	B	976	985	Right-handed alpha
Helix 82	AJ1	B	987	996	Right-handed alpha
Helix 83	AJ2	B	1013	1017	Right-handed 310
Helix 84	AJ3	B	1021	1033	Right-handed alpha
Helix 85	AJ4	B	1132	1142	Right-handed alpha
Helix 86	AJ5	B	1144	1161	Right-handed alpha
Helix 87	AJ6	C	90	95	Right-handed alpha
Helix 88	AJ7	C	96	106	Right-handed alpha
Helix 89	AJ8	C	108	136	Right-handed alpha
Helix 90	AJ9	C	138	142	Right-handed 310
Helix 91	AK1	C	164	169	Right-handed alpha
Helix 92	AK2	C	174	198	Right-handed alpha
Helix 93	AK3	C	204	209	Right-handed alpha
Helix 94	AK4	C	209	225	Right-handed alpha
Helix 95	AK5	C	237	239	Right-handed 310
Helix 96	AK6	C	240	256	Right-handed alpha
Helix 97	AK7	C	267	293	Right-handed alpha
Helix 98	AK8	C	300	313	Right-handed alpha
Helix 99	AK9	C	324	354	Right-handed alpha
Helix 100	AL1	C	364	372	Right-handed alpha
Helix 101	AL2	C	382	394	Right-handed alpha
Helix 102	AL3	C	396	400	Right-handed 310
Helix 103	AL4	C	413	420	Right-handed alpha
Helix 104	AL5	C	438	445	Right-handed alpha
Helix 105	AL6	C	465	482	Right-handed alpha
Helix 106	AL7	C	493	498	Right-handed 310
Helix 107	AL8	C	509	518	Right-handed alpha
Helix 108	AL9	C	525	534	Right-handed alpha
Helix 109	AM1	C	547	557	Right-handed alpha
Helix 110	AM2	C	579	591	Right-handed alpha
Helix 111	AM3	C	629	633	Right-handed 310
Helix 112	AM4	C	775	780	Right-handed alpha
Helix 113	AM5	C	792	797	Right-handed alpha
Helix 114	AM6	C	811	823	Right-handed alpha
Helix 115	AM7	C	843	851	Right-handed alpha
Helix 116	AM8	C	865	873	Right-handed alpha
Helix 117	AM9	C	887	891	Right-handed 310
Helix 118	AN1	C	893	898	Right-handed alpha
Helix 119	AN2	C	898	912	Right-handed alpha
Helix 120	AN3	C	923	930	Right-handed 310
Helix 121	AN4	C	937	953	Right-handed alpha
Helix 122	AN5	C	961	966	Right-handed alpha
Helix 123	AN6	C	973	975	Right-handed 310
Helix 124	AN7	C	976	985	Right-handed alpha
Helix 125	AN8	C	987	996	Right-handed alpha
Helix 126	AN9	C	1013	1017	Right-handed 310
Helix 127	AO1	C	1021	1033	Right-handed alpha
Helix 128	AO2	C	1132	1142	Right-handed alpha
Helix 129	AO3	C	1144	1161	Right-handed alpha
Helix 130	AO4	D	90	95	Right-handed alpha
Helix 131	AO5	D	96	106	Right-handed alpha
Helix 132	AO6	D	108	136	Right-handed alpha
Helix 133	AO7	D	138	142	Right-handed 310
Helix 134	AO8	D	164	169	Right-handed alpha
Helix 135	AO9	D	174	198	Right-handed alpha
Helix 136	AP1	D	204	209	Right-handed alpha
Helix 137	AP2	D	209	225	Right-handed alpha
Helix 138	AP3	D	237	239	Right-handed 310
Helix 139	AP4	D	240	254	Right-handed alpha
Helix 140	AP5	D	267	293	Right-handed alpha
Helix 141	AP6	D	300	313	Right-handed alpha
Helix 142	AP7	D	324	354	Right-handed alpha
Helix 143	AP8	D	364	369	Right-handed alpha
Helix 144	AP9	D	382	394	Right-handed alpha
Helix 145	AQ1	D	396	400	Right-handed 310
Helix 146	AQ2	D	413	420	Right-handed alpha
Helix 147	AQ3	D	438	445	Right-handed alpha
Helix 148	AQ4	D	465	482	Right-handed alpha
Helix 149	AQ5	D	493	498	Right-handed 310
Helix 150	AQ6	D	509	518	Right-handed alpha
Helix 151	AQ7	D	525	534	Right-handed alpha
Helix 152	AQ8	D	547	557	Right-handed alpha
Helix 153	AQ9	D	579	591	Right-handed alpha
Helix 154	AR1	D	629	633	Right-handed 310
Helix 155	AR2	D	775	780	Right-handed alpha
Helix 156	AR3	D	792	797	Right-handed alpha
Helix 157	AR4	D	811	823	Right-handed alpha
Helix 158	AR5	D	843	851	Right-handed alpha
Helix 159	AR6	D	865	873	Right-handed alpha
Helix 160	AR7	D	887	891	Right-handed 310
Helix 161	AR8	D	893	898	Right-handed alpha
Helix 162	AR9	D	898	912	Right-handed alpha
Helix 163	AS1	D	923	930	Right-handed 310
Helix 164	AS2	D	937	953	Right-handed alpha
Helix 165	AS3	D	961	966	Right-handed alpha
Helix 166	AS4	D	971	975	Right-handed 310
Helix 167	AS5	D	976	985	Right-handed alpha
Helix 168	AS6	D	987	996	Right-handed alpha
Helix 169	AS7	D	1013	1017	Right-handed 310
Helix 170	AS8	D	1021	1033	Right-handed alpha
Helix 171	AS9	D	1132	1142	Right-handed alpha
Helix 172	AT1	D	1144	1161	Right-handed alpha

There are 24 sheets in PDB entry 8HIR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	144	first strand
Strand 2	A	150	151	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	433	first strand
Strand 2	A	404	408	parallel
Strand 3	A	374	377	parallel
Strand 4	A	453	456	parallel
Strand 5	A	487	491	parallel
Strand 6	A	505	508	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	560	565	first strand
Strand 2	A	621	626	anti-parallel
Strand 3	A	594	599	anti-parallel
Strand 4	A	607	608	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	750	752	first strand
Strand 2	A	767	769	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	856	860	first strand
Strand 2	A	834	838	parallel
Strand 3	A	802	805	parallel
Strand 4	A	877	882	parallel
Strand 5	A	916	919	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1006	1012	first strand
Strand 2	A	1194	1200	anti-parallel
Strand 3	A	1036	1044	anti-parallel
Strand 4	A	1177	1182	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	144	first strand
Strand 2	B	150	151	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	429	433	first strand
Strand 2	B	404	408	parallel
Strand 3	B	374	377	parallel
Strand 4	B	453	456	parallel
Strand 5	B	487	491	parallel
Strand 6	B	505	508	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	560	565	first strand
Strand 2	B	621	626	anti-parallel
Strand 3	B	594	599	anti-parallel
Strand 4	B	607	608	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	750	752	first strand
Strand 2	B	767	769	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	856	860	first strand
Strand 2	B	834	838	parallel
Strand 3	B	802	805	parallel
Strand 4	B	877	882	parallel
Strand 5	B	916	921	parallel
Strand 6	B	969	971	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1006	1012	first strand
Strand 2	B	1194	1200	anti-parallel
Strand 3	B	1036	1044	anti-parallel
Strand 4	B	1177	1182	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	144	first strand
Strand 2	C	150	151	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	429	433	first strand
Strand 2	C	404	408	parallel
Strand 3	C	374	378	parallel
Strand 4	C	453	456	parallel
Strand 5	C	487	491	parallel
Strand 6	C	505	508	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	560	565	first strand
Strand 2	C	621	626	anti-parallel
Strand 3	C	594	599	anti-parallel
Strand 4	C	607	608	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	750	752	first strand
Strand 2	C	767	769	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	856	860	first strand
Strand 2	C	834	838	parallel
Strand 3	C	802	805	parallel
Strand 4	C	877	882	parallel
Strand 5	C	916	921	parallel
Strand 6	C	969	971	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1006	1012	first strand
Strand 2	C	1194	1200	anti-parallel
Strand 3	C	1036	1044	anti-parallel
Strand 4	C	1177	1182	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	144	first strand
Strand 2	D	150	151	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	429	433	first strand
Strand 2	D	404	408	parallel
Strand 3	D	374	378	parallel
Strand 4	D	453	456	parallel
Strand 5	D	487	491	parallel
Strand 6	D	505	508	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	560	565	first strand
Strand 2	D	621	626	anti-parallel
Strand 3	D	594	599	anti-parallel
Strand 4	D	607	608	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	750	752	first strand
Strand 2	D	767	769	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	856	860	first strand
Strand 2	D	834	838	parallel
Strand 3	D	802	805	parallel
Strand 4	D	877	882	parallel
Strand 5	D	916	919	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1006	1012	first strand
Strand 2	D	1194	1200	anti-parallel
Strand 3	D	1036	1044	anti-parallel
Strand 4	D	1177	1182	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HIR

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HIR