Analysis of interatomic Contacts of Structural Units in PDB entry:
8HIU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HIU entry

There are 2 chains in PDB entry 8HIU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 597
B	MET 1	ARG 597

There are 50 helices in PDB entry 8HIU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	21	Right-handed alpha
Helix 2	AA2	A	53	58	Right-handed alpha
Helix 3	AA3	A	66	76	Right-handed alpha
Helix 4	AA4	A	94	107	Right-handed alpha
Helix 5	AA5	A	114	129	Right-handed alpha
Helix 6	AA6	A	131	144	Right-handed alpha
Helix 7	AA7	A	148	150	Right-handed 310
Helix 8	AA8	A	156	169	Right-handed alpha
Helix 9	AA9	A	211	223	Right-handed alpha
Helix 10	AB1	A	231	238	Right-handed alpha
Helix 11	AB2	A	239	241	Right-handed 310
Helix 12	AB3	A	249	254	Right-handed alpha
Helix 13	AB4	A	273	277	Right-handed 310
Helix 14	AB5	A	278	287	Right-handed alpha
Helix 15	AB6	A	295	323	Right-handed alpha
Helix 16	AB7	A	334	338	Right-handed 310
Helix 17	AB8	A	339	350	Right-handed alpha
Helix 18	AB9	A	363	378	Right-handed alpha
Helix 19	AC1	A	395	403	Right-handed alpha
Helix 20	AC2	A	416	428	Right-handed alpha
Helix 21	AC3	A	461	470	Right-handed alpha
Helix 22	AC4	A	485	492	Right-handed alpha
Helix 23	AC5	A	517	521	Right-handed 310
Helix 24	AC6	A	537	552	Right-handed alpha
Helix 25	AC7	A	571	581	Right-handed alpha
Helix 26	AC8	B	11	21	Right-handed alpha
Helix 27	AC9	B	53	58	Right-handed alpha
Helix 28	AD1	B	66	78	Right-handed alpha
Helix 29	AD2	B	94	107	Right-handed alpha
Helix 30	AD3	B	111	129	Right-handed alpha
Helix 31	AD4	B	131	144	Right-handed alpha
Helix 32	AD5	B	156	170	Right-handed alpha
Helix 33	AD6	B	211	223	Right-handed alpha
Helix 34	AD7	B	231	241	Right-handed alpha
Helix 35	AD8	B	245	248	Right-handed 310
Helix 36	AD9	B	249	254	Right-handed alpha
Helix 37	AE1	B	274	276	Right-handed 310
Helix 38	AE2	B	277	286	Right-handed alpha
Helix 39	AE3	B	295	325	Right-handed alpha
Helix 40	AE4	B	334	338	Right-handed 310
Helix 41	AE5	B	339	349	Right-handed alpha
Helix 42	AE6	B	362	364	Right-handed 310
Helix 43	AE7	B	365	378	Right-handed alpha
Helix 44	AE8	B	395	406	Right-handed alpha
Helix 45	AE9	B	416	430	Right-handed alpha
Helix 46	AF1	B	461	471	Right-handed alpha
Helix 47	AF2	B	487	492	Right-handed alpha
Helix 48	AF3	B	517	521	Right-handed 310
Helix 49	AF4	B	537	552	Right-handed alpha
Helix 50	AF5	B	571	582	Right-handed alpha

There are 11 sheets in PDB entry 8HIU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	52	first strand
Strand 2	A	38	43	anti-parallel
Strand 3	A	2	7	anti-parallel
Strand 4	A	86	88	parallel
Strand 5	A	152	153	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	197	207	first strand
Strand 2	A	186	194	anti-parallel
Strand 3	A	174	179	anti-parallel
Strand 4	A	329	333	parallel
Strand 5	A	354	356	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	259	first strand
Strand 2	A	263	266	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	410	411	first strand
Strand 2	A	592	596	anti-parallel
Strand 3	A	586	589	anti-parallel
Strand 4	A	433	437	parallel
Strand 5	A	451	455	anti-parallel
Strand 6	A	555	560	anti-parallel
Strand 7	A	481	484	anti-parallel
Strand 8	A	530	532	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	507	508	first strand
Strand 2	A	526	527	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	52	first strand
Strand 2	B	38	43	anti-parallel
Strand 3	B	2	6	anti-parallel
Strand 4	B	86	89	parallel
Strand 5	B	152	154	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	197	199	first strand
Strand 2	B	186	194	anti-parallel
Strand 3	B	206	207	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	197	199	first strand
Strand 2	B	186	194	anti-parallel
Strand 3	B	174	179	anti-parallel
Strand 4	B	329	333	parallel
Strand 5	B	354	355	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	257	first strand
Strand 2	B	265	266	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	410	414	first strand
Strand 2	B	592	596	anti-parallel
Strand 3	B	586	589	anti-parallel
Strand 4	B	433	437	parallel
Strand 5	B	451	455	anti-parallel
Strand 6	B	555	560	anti-parallel
Strand 7	B	481	484	anti-parallel
Strand 8	B	530	532	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	507	508	first strand
Strand 2	B	526	527	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HIU

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HIU