Analysis of interatomic Contacts of Structural Units in PDB entry:
8HJK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HJK entry

There is 1 chain in PDB entry 8HJK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 9HIS 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8HJK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 35Right-handed alpha
Helix 2
AA2
A
45 53Right-handed alpha
Helix 3
AA3
A
54 56Right-handed 310
Helix 4
AA4
A
57 61Right-handed 310
Helix 5
AA5
A
78 82Right-handed 310
Helix 6
AA6
A
88 90Right-handed 310
Helix 7
AA7
A
91 101Right-handed alpha
Helix 8
AA8
A
102 114Right-handed alpha
Helix 9
AA9
A
125 134Right-handed alpha
Helix 10
AB1
A
146 158Right-handed alpha
Helix 11
AB2
A
171 178Right-handed alpha
Helix 12
AB3
A
189 202Right-handed alpha
Helix 13
AB4
A
212 228Right-handed alpha
Helix 14
AB5
A
250 259Right-handed alpha
Helix 15
AB6
A
277 292Right-handed alpha
Helix 16
AB7
A
309 314Right-handed alpha
Helix 17
AB8
A
317 323Right-handed alpha
Helix 18
AB9
A
334 341Right-handed alpha
Helix 19
AC1
A
352 362Right-handed alpha
Helix 20
AC2
A
374 386Right-handed alpha
Helix 21
AC3
A
400 412Right-handed alpha
Helix 22
AC4
A
417 434Right-handed alpha
Helix 23
AC5
A
435 438Right-handed 310
Helix 24
AC6
A
439 457Right-handed alpha
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There are 2 sheets in PDB entry 8HJK. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 68first strand
Strand 2
A
38 44parallel
Strand 3
A
10 15parallel
Strand 4
A
117 120parallel
Strand 5
A
138 142parallel
Strand 6
A
206 209parallel
Strand 7
A
230 233parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 330first strand
Strand 2
A
294 299parallel
Strand 3
A
265 269parallel
Strand 4
A
344 349parallel
Strand 5
A
366 368parallel
Strand 6
A
388 390parallel
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