Analysis of interatomic Contacts of Structural Units in PDB entry:
8HKW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HKW entry

There are 4 chains in PDB entry 8HKW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 71PHE 485
B
 THR 71PHE 485
C
 GLY 1666SER 1686
D
 GLY 1666SER 1686
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 66 helices in PDB entry 8HKW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 80Right-handed alpha
Helix 2
AA2
A
84 101Right-handed alpha
Helix 3
AA3
A
106 114Right-handed alpha
Helix 4
AA4
A
115 123Right-handed alpha
Helix 5
AA5
A
128 143Right-handed alpha
Helix 6
AA6
A
146 156Right-handed alpha
Helix 7
AA7
A
157 166Right-handed alpha
Helix 8
AA8
A
170 186Right-handed alpha
Helix 9
AA9
A
188 198Right-handed alpha
Helix 10
AB1
A
200 206Right-handed alpha
Helix 11
AB2
A
213 229Right-handed alpha
Helix 12
AB3
A
236 251Right-handed alpha
Helix 13
AB4
A
255 271Right-handed alpha
Helix 14
AB5
A
273 283Right-handed alpha
Helix 15
AB6
A
285 290Right-handed alpha
Helix 16
AB7
A
291 295Right-handed 310
Helix 17
AB8
A
297 312Right-handed alpha
Helix 18
AB9
A
315 324Right-handed alpha
Helix 19
AC1
A
325 329Right-handed 310
Helix 20
AC2
A
330 336Right-handed alpha
Helix 21
AC3
A
339 355Right-handed alpha
Helix 22
AC4
A
357 367Right-handed alpha
Helix 23
AC5
A
369 380Right-handed alpha
Helix 24
AC6
A
381 399Right-handed alpha
Helix 25
AC7
A
400 410Right-handed alpha
Helix 26
AC8
A
412 418Right-handed alpha
Helix 27
AC9
A
419 422Right-handed 310
Helix 28
AD1
A
424 442Right-handed alpha
Helix 29
AD2
A
445 456Right-handed alpha
Helix 30
AD3
A
457 465Right-handed alpha
Helix 31
AD4
A
466 468Right-handed 310
Helix 32
AD5
A
470 485Right-handed alpha
Helix 33
AD6
B
72 80Right-handed alpha
Helix 34
AD7
B
84 101Right-handed alpha
Helix 35
AD8
B
106 113Right-handed alpha
Helix 36
AD9
B
115 123Right-handed alpha
Helix 37
AE1
B
128 144Right-handed alpha
Helix 38
AE2
B
146 156Right-handed alpha
Helix 39
AE3
B
158 166Right-handed alpha
Helix 40
AE4
B
170 186Right-handed alpha
Helix 41
AE5
B
188 198Right-handed alpha
Helix 42
AE6
B
200 206Right-handed alpha
Helix 43
AE7
B
213 229Right-handed alpha
Helix 44
AE8
B
236 251Right-handed alpha
Helix 45
AE9
B
255 271Right-handed alpha
Helix 46
AF1
B
273 283Right-handed alpha
Helix 47
AF2
B
285 290Right-handed alpha
Helix 48
AF3
B
291 295Right-handed 310
Helix 49
AF4
B
297 312Right-handed alpha
Helix 50
AF5
B
315 324Right-handed alpha
Helix 51
AF6
B
325 329Right-handed 310
Helix 52
AF7
B
330 336Right-handed alpha
Helix 53
AF8
B
339 355Right-handed alpha
Helix 54
AF9
B
357 367Right-handed alpha
Helix 55
AG1
B
369 380Right-handed alpha
Helix 56
AG2
B
381 399Right-handed alpha
Helix 57
AG3
B
400 410Right-handed alpha
Helix 58
AG4
B
412 418Right-handed alpha
Helix 59
AG5
B
419 422Right-handed 310
Helix 60
AG6
B
424 442Right-handed alpha
Helix 61
AG7
B
445 456Right-handed alpha
Helix 62
AG8
B
457 465Right-handed alpha
Helix 63
AG9
B
466 468Right-handed 310
Helix 64
AH1
B
470 485Right-handed alpha
Helix 65
AH2
C
1672 1678Right-handed alpha
Helix 66
AH3
D
1672 1678Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8HKW
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il