Analysis of interatomic Contacts of Structural Units in PDB entry:
8HL7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HL7 entry

There are 3 chains in PDB entry 8HL7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 15LYS 222
B
 PRO 23GLU 314
B
 THR 316GLN 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 8HL7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 41Right-handed 310
Helix 2
AA2
A
43 54Right-handed alpha
Helix 3
AA3
A
79 87Right-handed alpha
Helix 4
AA4
A
97 99Right-handed 310
Helix 5
AA5
A
100 112Right-handed alpha
Helix 6
AA6
A
113 115Right-handed 310
Helix 7
AA7
A
148 151Right-handed 310
Helix 8
AA8
A
152 163Right-handed alpha
Helix 9
AA9
A
180 193Right-handed alpha
Helix 10
AB1
A
202 206Right-handed 310
Helix 11
AB2
B
42 49Right-handed alpha
Helix 12
AB3
B
85 92Right-handed alpha
Helix 13
AB4
B
119 124Right-handed alpha
Helix 14
AB5
B
129 134Right-handed alpha
Helix 15
AB6
B
134 140Right-handed alpha
Helix 16
AB7
B
202 206Right-handed 310
Helix 17
AB8
B
209 226Right-handed alpha
Helix 18
AB9
B
228 234Right-handed alpha
Helix 19
AC1
B
250 263Right-handed alpha
Helix 20
AC2
B
271 277Right-handed alpha
Helix 21
AC3
B
280 296Right-handed alpha
Helix 22
AC4
B
305 310Right-handed alpha
Helix 23
AC5
B
323 334Right-handed alpha
Helix 24
AC6
B
349 353Right-handed 310
Helix 25
AC7
B
354 359Right-handed 310
Helix 26
AC8
B
373 385Right-handed alpha
Helix 27
AC9
B
395 402Right-handed alpha
Helix 28
AD1
B
407 428Right-handed alpha
Helix 29
AD2
B
448 457Right-handed alpha
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There are 6 sheets in PDB entry 8HL7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 21first strand
Strand 2
A
27 32anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 123first strand
Strand 2
A
91 96parallel
Strand 3
A
70 74parallel
Strand 4
A
139 143parallel
Strand 5
A
168 174parallel
Strand 6
A
215 221anti-parallel
Strand 7
A
197 200anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 30first strand
Strand 2
B
81 84parallel
Strand 3
B
38 41anti-parallel
Strand 4
B
66 73parallel
Strand 5
B
56 60anti-parallel
Strand 6
B
99 104anti-parallel
Strand 7
B
25 30anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 154first strand
Strand 2
B
161 167anti-parallel
Strand 3
B
113 118anti-parallel
Strand 4
B
181 183parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
175 176anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 270first strand
Strand 2
B
299 304parallel
Strand 3
B
341 347parallel
Strand 4
B
240 244parallel
Strand 5
B
363 368parallel
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