Analysis of interatomic Contacts of Structural Units in PDB entry:
8HLK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HLK entry

There is 1 chain in PDB entry 8HLK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 14ASP 963
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8HLK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
51 66Right-handed alpha
Helix 3
AA3
A
67 69Right-handed 310
Helix 4
AA4
A
156 171Right-handed alpha
Helix 5
AA5
A
187 196Right-handed alpha
Helix 6
AA6
A
197 209Right-handed alpha
Helix 7
AA7
A
242 257Right-handed alpha
Helix 8
AA8
A
259 277Right-handed alpha
Helix 9
AA9
A
319 337Right-handed alpha
Helix 10
AB1
A
341 349Right-handed alpha
Helix 11
AB2
A
417 438Right-handed alpha
Helix 12
AB3
A
442 446Right-handed 310
Helix 13
AB4
A
450 459Right-handed alpha
Helix 14
AB5
A
473 485Right-handed alpha
Helix 15
AB6
A
500 517Right-handed alpha
Helix 16
AB7
A
532 546Right-handed alpha
Helix 17
AB8
A
557 569Right-handed alpha
Helix 18
AB9
A
576 581Right-handed alpha
Helix 19
AC1
A
596 602Right-handed alpha
Helix 20
AC2
A
637 651Right-handed alpha
Helix 21
AC3
A
667 669Right-handed 310
Helix 22
AC4
A
670 679Right-handed alpha
Helix 23
AC5
A
688 693Right-handed alpha
Helix 24
AC6
A
694 705Right-handed alpha
Helix 25
AC7
A
713 721Right-handed alpha
Helix 26
AC8
A
759 763Right-handed 310
Helix 27
AC9
A
825 832Right-handed alpha
Helix 28
AD1
A
865 867Right-handed 310
Helix 29
AD2
A
876 887Right-handed alpha
Helix 30
AD3
A
919 931Right-handed alpha
Helix 31
AD4
A
955 959Right-handed 310
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There are 10 sheets in PDB entry 8HLK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 137first strand
Strand 2
A
143 149anti-parallel
Strand 3
A
39 46anti-parallel
Strand 4
A
381 386anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 74first strand
Strand 2
A
85 88anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 240first strand
Strand 2
A
405 412anti-parallel
Strand 3
A
395 401anti-parallel
Strand 4
A
360 364parallel
Strand 5
A
280 286parallel
Strand 6
A
307 313anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 499first strand
Strand 2
A
489 493anti-parallel
Strand 3
A
683 686parallel
Strand 4
A
658 661parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
548 551first strand
Strand 2
A
524 527parallel
Strand 3
A
572 575parallel
Strand 4
A
589 592parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
617 623first strand
Strand 2
A
631 636anti-parallel
Strand 3
A
821 822anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
709 711first strand
Strand 2
A
733 737parallel
Strand 3
A
752 757parallel
Strand 4
A
767 771anti-parallel
Strand 5
A
786 787anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
791 796first strand
Strand 2
A
809 815anti-parallel
Strand 3
A
842 852anti-parallel
Strand 4
A
833 835anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
791 796first strand
Strand 2
A
809 815anti-parallel
Strand 3
A
842 852anti-parallel
Strand 4
A
858 863anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
890 896first strand
Strand 2
A
908 913anti-parallel
Strand 3
A
939 943parallel
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