Analysis of interatomic Contacts of Structural Units in PDB entry:
8HLT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HLT entry

There are 4 chains in PDB entry 8HLT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 78THR 308
A
 ILE 310LEU 462
B
 ALA 78THR 308
B
 ILE 310ARG 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 8HLT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 91Right-handed alpha
Helix 2
AA2
A
92 94Right-handed 310
Helix 3
AA3
A
95 102Right-handed alpha
Helix 4
AA4
A
103 105Right-handed 310
Helix 5
AA5
A
124 129Right-handed alpha
Helix 6
AA6
A
183 202Right-handed alpha
Helix 7
AA7
A
234 242Right-handed alpha
Helix 8
AA8
A
248 269Right-handed alpha
Helix 9
AA9
A
277 279Right-handed 310
Helix 10
AB1
A
295 299Right-handed 310
Helix 11
AB2
A
312 316Right-handed 310
Helix 12
AB3
A
317 323Right-handed alpha
Helix 13
AB4
A
328 345Right-handed alpha
Helix 14
AB5
A
353 366Right-handed alpha
Helix 15
AB6
A
369 375Right-handed alpha
Helix 16
AB7
A
378 383Right-handed alpha
Helix 17
AB8
A
422 427Right-handed alpha
Helix 18
AB9
A
432 443Right-handed alpha
Helix 19
AC1
A
452 458Right-handed alpha
Helix 20
AC2
B
82 91Right-handed alpha
Helix 21
AC3
B
92 94Right-handed 310
Helix 22
AC4
B
95 102Right-handed alpha
Helix 23
AC5
B
103 105Right-handed 310
Helix 24
AC6
B
124 129Right-handed alpha
Helix 25
AC7
B
183 201Right-handed alpha
Helix 26
AC8
B
234 242Right-handed alpha
Helix 27
AC9
B
248 269Right-handed alpha
Helix 28
AD1
B
277 279Right-handed 310
Helix 29
AD2
B
295 299Right-handed 310
Helix 30
AD3
B
312 316Right-handed 310
Helix 31
AD4
B
317 323Right-handed alpha
Helix 32
AD5
B
328 345Right-handed alpha
Helix 33
AD6
B
353 366Right-handed alpha
Helix 34
AD7
B
369 375Right-handed alpha
Helix 35
AD8
B
376 382Right-handed 310
Helix 36
AD9
B
422 427Right-handed alpha
Helix 37
AE1
B
432 443Right-handed alpha
Helix 38
AE2
B
452 459Right-handed alpha
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There are 10 sheets in PDB entry 8HLT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
149 158anti-parallel
Strand 3
A
161 168anti-parallel
Strand 4
A
173 180anti-parallel
Strand 5
A
223 229anti-parallel
Strand 6
A
214 220anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 272first strand
Strand 2
A
300 301anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 283first strand
Strand 2
A
291 293anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 396first strand
Strand 2
A
402 405anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 408first strand
Strand 2
A
414 415anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
149 158anti-parallel
Strand 3
B
161 168anti-parallel
Strand 4
B
173 180anti-parallel
Strand 5
B
223 229anti-parallel
Strand 6
B
214 220anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 272first strand
Strand 2
B
300 301anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
281 283first strand
Strand 2
B
291 293anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
393 396first strand
Strand 2
B
402 405anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 408first strand
Strand 2
B
414 415anti-parallel
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