Analysis of interatomic Contacts of Structural Units in PDB entry:
8HLZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HLZ entry

There are 6 chains in PDB entry 8HLZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	MET 1	GLU 426
E	MET 1	TYR 218
D	MET 1	GLY 998
C	MET 1	GLU 426
B	MET 1	TYR 218
A	MET 1	GLY 998

There are 98 helices in PDB entry 8HLZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	4	18	Right-handed alpha
Helix 2	AA2	F	24	40	Right-handed alpha
Helix 3	AA3	F	107	118	Right-handed alpha
Helix 4	AA4	F	148	158	Right-handed alpha
Helix 5	AA5	F	177	189	Right-handed alpha
Helix 6	AA6	F	249	255	Right-handed alpha
Helix 7	AA7	F	285	298	Right-handed alpha
Helix 8	AA8	F	313	323	Right-handed alpha
Helix 9	AA9	F	330	341	Right-handed alpha
Helix 10	AB1	F	341	349	Right-handed alpha
Helix 11	AB2	F	352	360	Right-handed alpha
Helix 12	AB3	F	366	373	Right-handed alpha
Helix 13	AB4	F	392	396	Right-handed 310
Helix 14	AB5	F	397	406	Right-handed alpha
Helix 15	AB6	F	406	425	Right-handed alpha
Helix 16	AB7	E	16	18	Right-handed 310
Helix 17	AB8	E	19	38	Right-handed alpha
Helix 18	AB9	E	49	54	Right-handed 310
Helix 19	AC1	E	86	101	Right-handed alpha
Helix 20	AC2	E	133	152	Right-handed alpha
Helix 21	AC3	E	187	192	Right-handed alpha
Helix 22	AC4	E	197	205	Right-handed alpha
Helix 23	AC5	D	44	49	Right-handed alpha
Helix 24	AC6	D	108	116	Right-handed alpha
Helix 25	AC7	D	144	149	Right-handed alpha
Helix 26	AC8	D	206	208	Right-handed 310
Helix 27	AC9	D	209	220	Right-handed alpha
Helix 28	AD1	D	240	253	Right-handed alpha
Helix 29	AD2	D	267	281	Right-handed alpha
Helix 30	AD3	D	330	339	Right-handed alpha
Helix 31	AD4	D	345	354	Right-handed alpha
Helix 32	AD5	D	380	390	Right-handed alpha
Helix 33	AD6	D	439	446	Right-handed alpha
Helix 34	AD7	D	448	474	Right-handed alpha
Helix 35	AD8	D	474	485	Right-handed alpha
Helix 36	AD9	D	497	502	Right-handed alpha
Helix 37	AE1	D	502	513	Right-handed alpha
Helix 38	AE2	D	552	561	Right-handed alpha
Helix 39	AE3	D	579	590	Right-handed alpha
Helix 40	AE4	D	621	643	Right-handed alpha
Helix 41	AE5	D	648	666	Right-handed alpha
Helix 42	AE6	D	667	673	Right-handed alpha
Helix 43	AE7	D	680	687	Right-handed alpha
Helix 44	AE8	D	688	701	Right-handed alpha
Helix 45	AE9	D	767	782	Right-handed alpha
Helix 46	AF1	D	841	854	Right-handed alpha
Helix 47	AF2	D	859	882	Right-handed alpha
Helix 48	AF3	D	967	979	Right-handed alpha
Helix 49	AF4	D	985	996	Right-handed alpha
Helix 50	AF5	C	4	18	Right-handed alpha
Helix 51	AF6	C	24	40	Right-handed alpha
Helix 52	AF7	C	107	118	Right-handed alpha
Helix 53	AF8	C	148	158	Right-handed alpha
Helix 54	AF9	C	177	189	Right-handed alpha
Helix 55	AG1	C	249	257	Right-handed alpha
Helix 56	AG2	C	285	298	Right-handed alpha
Helix 57	AG3	C	313	323	Right-handed alpha
Helix 58	AG4	C	330	341	Right-handed alpha
Helix 59	AG5	C	341	349	Right-handed alpha
Helix 60	AG6	C	352	360	Right-handed alpha
Helix 61	AG7	C	366	373	Right-handed alpha
Helix 62	AG8	C	392	396	Right-handed 310
Helix 63	AG9	C	397	406	Right-handed alpha
Helix 64	AH1	C	406	425	Right-handed alpha
Helix 65	AH2	B	16	18	Right-handed 310
Helix 66	AH3	B	19	38	Right-handed alpha
Helix 67	AH4	B	50	54	Right-handed 310
Helix 68	AH5	B	86	101	Right-handed alpha
Helix 69	AH6	B	133	152	Right-handed alpha
Helix 70	AH7	B	187	192	Right-handed alpha
Helix 71	AH8	B	197	205	Right-handed alpha
Helix 72	AH9	A	44	49	Right-handed alpha
Helix 73	AI1	A	108	116	Right-handed alpha
Helix 74	AI2	A	144	149	Right-handed alpha
Helix 75	AI3	A	206	208	Right-handed 310
Helix 76	AI4	A	209	220	Right-handed alpha
Helix 77	AI5	A	240	253	Right-handed alpha
Helix 78	AI6	A	267	281	Right-handed alpha
Helix 79	AI7	A	330	339	Right-handed alpha
Helix 80	AI8	A	345	354	Right-handed alpha
Helix 81	AI9	A	380	390	Right-handed alpha
Helix 82	AJ1	A	439	446	Right-handed alpha
Helix 83	AJ2	A	448	474	Right-handed alpha
Helix 84	AJ3	A	474	485	Right-handed alpha
Helix 85	AJ4	A	497	502	Right-handed alpha
Helix 86	AJ5	A	502	513	Right-handed alpha
Helix 87	AJ6	A	552	561	Right-handed alpha
Helix 88	AJ7	A	579	590	Right-handed alpha
Helix 89	AJ8	A	621	643	Right-handed alpha
Helix 90	AJ9	A	648	666	Right-handed alpha
Helix 91	AK1	A	667	673	Right-handed alpha
Helix 92	AK2	A	680	687	Right-handed alpha
Helix 93	AK3	A	688	701	Right-handed alpha
Helix 94	AK4	A	766	782	Right-handed alpha
Helix 95	AK5	A	841	854	Right-handed alpha
Helix 96	AK6	A	859	882	Right-handed alpha
Helix 97	AK7	A	967	979	Right-handed alpha
Helix 98	AK8	A	985	996	Right-handed alpha

There are 38 sheets in PDB entry 8HLZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	126	132	first strand
Strand 2	F	135	142	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	197	199	first strand
Strand 2	F	208	210	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	244	245	first strand
Strand 2	F	237	239	anti-parallel
Strand 3	F	214	222	anti-parallel
Strand 4	F	262	268	anti-parallel
Strand 5	F	273	274	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	226	227	first strand
Strand 2	F	233	234	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	301	304	first strand
Strand 2	F	307	310	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	375	380	first strand
Strand 2	F	383	389	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	5	first strand
Strand 2	E	12	15	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	42	43	first strand
Strand 2	E	125	126	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	116	120	first strand
Strand 2	E	62	66	parallel
Strand 3	E	154	158	parallel
Strand 4	E	175	179	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	124	126	first strand
Strand 2	D	2	12	anti-parallel
Strand 3	D	16	23	anti-parallel
Strand 4	D	29	35	anti-parallel
Strand 5	D	139	141	parallel
Strand 6	D	133	136	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	43	first strand
Strand 2	D	83	93	anti-parallel
Strand 3	D	56	67	anti-parallel
Strand 4	D	515	518	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	72	73	first strand
Strand 2	D	568	572	parallel
Strand 3	D	612	616	anti-parallel
Strand 4	D	596	600	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	162	169	first strand
Strand 2	D	183	191	anti-parallel
Strand 3	D	197	204	anti-parallel
Strand 4	D	237	239	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	259	first strand
Strand 2	D	327	328	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	285	287	first strand
Strand 2	D	294	296	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	300	301	first strand
Strand 2	D	318	319	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	355	360	first strand
Strand 2	D	368	372	anti-parallel
Strand 3	D	415	419	anti-parallel
Strand 4	D	402	410	anti-parallel
Strand 5	D	394	397	anti-parallel
Strand 6	D	428	432	anti-parallel
Strand 7	D	355	360	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	549	first strand
Strand 2	D	754	755	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	707	first strand
Strand 2	D	742	743	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	132	first strand
Strand 2	C	135	142	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	197	199	first strand
Strand 2	C	208	210	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	244	245	first strand
Strand 2	C	237	239	anti-parallel
Strand 3	C	214	222	anti-parallel
Strand 4	C	262	268	anti-parallel
Strand 5	C	273	274	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	226	227	first strand
Strand 2	C	233	234	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	304	first strand
Strand 2	C	307	310	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	380	first strand
Strand 2	C	383	389	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	5	first strand
Strand 2	B	12	15	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	B	125	126	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	120	first strand
Strand 2	B	62	66	parallel
Strand 3	B	154	158	parallel
Strand 4	B	175	179	parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	124	126	first strand
Strand 2	A	2	12	anti-parallel
Strand 3	A	16	23	anti-parallel
Strand 4	A	29	35	anti-parallel
Strand 5	A	139	141	parallel
Strand 6	A	133	136	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	43	first strand
Strand 2	A	83	93	anti-parallel
Strand 3	A	56	67	anti-parallel
Strand 4	A	515	518	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	73	first strand
Strand 2	A	568	572	parallel
Strand 3	A	612	616	anti-parallel
Strand 4	A	596	600	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	162	169	first strand
Strand 2	A	183	191	anti-parallel
Strand 3	A	197	204	anti-parallel
Strand 4	A	237	239	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	259	first strand
Strand 2	A	327	328	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	285	287	first strand
Strand 2	A	294	296	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	301	first strand
Strand 2	A	318	319	anti-parallel

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There are 7 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	360	first strand
Strand 2	A	368	372	anti-parallel
Strand 3	A	415	419	anti-parallel
Strand 4	A	402	410	anti-parallel
Strand 5	A	394	397	anti-parallel
Strand 6	A	428	432	anti-parallel
Strand 7	A	355	360	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	545	549	first strand
Strand 2	A	754	758	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	706	707	first strand
Strand 2	A	742	743	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HLZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HLZ