Analysis of interatomic Contacts of Structural Units in PDB entry:
8HNQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HNQ entry

There is 1 chain in PDB entry 8HNQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -4GLU 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8HNQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-2 2Right-handed 310
Helix 2
AA2
A
5 9Right-handed 310
Helix 3
AA3
A
15 17Right-handed 310
Helix 4
AA4
A
28 30Right-handed 310
Helix 5
AA5
A
41 52Right-handed alpha
Helix 6
AA6
A
53 56Right-handed 310
Helix 7
AA7
A
69 80Right-handed alpha
Helix 8
AA8
A
106 122Right-handed alpha
Helix 9
AA9
A
139 153Right-handed alpha
Helix 10
AB1
A
165 174Right-handed alpha
Helix 11
AB2
A
192 202Right-handed alpha
Helix 12
AB3
A
212 216Right-handed 310
Helix 13
AB4
A
220 230Right-handed alpha
Helix 14
AB5
A
233 246Right-handed alpha
Helix 15
AB6
A
257 267Right-handed alpha
Helix 16
AB7
A
268 270Right-handed 310
Helix 17
AB8
A
273 281Right-handed alpha
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There are 3 sheets in PDB entry 8HNQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
18 21anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
59 61parallel
Strand 3
A
86 91parallel
Strand 4
A
126 131parallel
Strand 5
A
156 162parallel
Strand 6
A
178 184parallel
Strand 7
A
205 209parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 97first strand
Strand 2
A
100 103anti-parallel
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