Analysis of interatomic Contacts of Structural Units in PDB entry:
8HO7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HO7 entry

There are 2 chains in PDB entry 8HO7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 810
B	MET 1	LEU 810

There are 47 helices in PDB entry 8HO7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	156	163	Right-handed alpha
Helix 2	AA2	A	163	168	Right-handed alpha
Helix 3	AA3	A	209	213	Right-handed alpha
Helix 4	AA4	A	222	228	Right-handed alpha
Helix 5	AA5	A	281	291	Right-handed alpha
Helix 6	AA6	A	293	313	Right-handed alpha
Helix 7	AA7	A	321	330	Right-handed alpha
Helix 8	AA8	A	330	343	Right-handed alpha
Helix 9	AA9	A	359	370	Right-handed alpha
Helix 10	AB1	A	373	387	Right-handed alpha
Helix 11	AB2	A	415	432	Right-handed alpha
Helix 12	AB3	A	433	438	Right-handed 310
Helix 13	AB4	A	453	467	Right-handed alpha
Helix 14	AB5	A	512	532	Right-handed alpha
Helix 15	AB6	A	534	556	Right-handed alpha
Helix 16	AB7	A	585	594	Right-handed alpha
Helix 17	AB8	A	601	614	Right-handed alpha
Helix 18	AB9	A	636	640	Right-handed 310
Helix 19	AC1	A	652	665	Right-handed alpha
Helix 20	AC2	A	667	677	Right-handed alpha
Helix 21	AC3	A	679	685	Right-handed 310
Helix 22	AC4	A	686	691	Right-handed alpha
Helix 23	AC5	A	719	731	Right-handed alpha
Helix 24	AC6	B	156	163	Right-handed alpha
Helix 25	AC7	B	163	168	Right-handed alpha
Helix 26	AC8	B	209	213	Right-handed alpha
Helix 27	AC9	B	222	228	Right-handed alpha
Helix 28	AD1	B	268	271	Right-handed 310
Helix 29	AD2	B	281	290	Right-handed alpha
Helix 30	AD3	B	293	312	Right-handed alpha
Helix 31	AD4	B	321	330	Right-handed alpha
Helix 32	AD5	B	330	343	Right-handed alpha
Helix 33	AD6	B	359	370	Right-handed alpha
Helix 34	AD7	B	373	387	Right-handed alpha
Helix 35	AD8	B	415	432	Right-handed alpha
Helix 36	AD9	B	433	438	Right-handed 310
Helix 37	AE1	B	453	465	Right-handed alpha
Helix 38	AE2	B	512	533	Right-handed alpha
Helix 39	AE3	B	534	556	Right-handed alpha
Helix 40	AE4	B	585	594	Right-handed alpha
Helix 41	AE5	B	601	614	Right-handed alpha
Helix 42	AE6	B	636	640	Right-handed 310
Helix 43	AE7	B	651	665	Right-handed alpha
Helix 44	AE8	B	667	677	Right-handed alpha
Helix 45	AE9	B	679	685	Right-handed 310
Helix 46	AF1	B	686	691	Right-handed alpha
Helix 47	AF2	B	719	731	Right-handed alpha

There are 25 sheets in PDB entry 8HO7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	7	first strand
Strand 2	A	12	15	anti-parallel
Strand 3	A	94	99	anti-parallel
Strand 4	A	103	110	anti-parallel
Strand 5	A	113	120	anti-parallel
Strand 6	A	127	136	anti-parallel
Strand 7	A	255	266	anti-parallel
Strand 8	A	192	198	anti-parallel
Strand 9	A	179	182	anti-parallel
Strand 10	A	173	176	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	28	first strand
Strand 2	A	33	38	anti-parallel
Strand 3	A	43	47	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	81	first strand
Strand 2	A	71	76	anti-parallel
Strand 3	A	142	151	anti-parallel
Strand 4	A	240	250	anti-parallel
Strand 5	A	204	208	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	275	first strand
Strand 2	A	278	279	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	315	318	first strand
Strand 2	A	754	760	anti-parallel
Strand 3	A	765	771	anti-parallel
Strand 4	A	803	809	parallel
Strand 5	A	782	785	anti-parallel
Strand 6	A	788	789	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	358	first strand
Strand 2	A	397	399	anti-parallel
Strand 3	A	404	405	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	443	first strand
Strand 2	A	446	452	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	510	511	first strand
Strand 2	A	565	566	anti-parallel
Strand 3	A	572	573	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	583	584	first strand
Strand 2	A	623	624	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	615	616	first strand
Strand 2	A	619	620	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	650	651	first strand
Strand 2	A	698	701	anti-parallel
Strand 3	A	712	715	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	735	738	first strand
Strand 2	A	741	744	anti-parallel
Strand 3	A	794	795	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	7	first strand
Strand 2	B	12	15	anti-parallel
Strand 3	B	94	99	anti-parallel
Strand 4	B	103	110	anti-parallel
Strand 5	B	113	120	anti-parallel
Strand 6	B	127	136	anti-parallel
Strand 7	B	255	266	anti-parallel
Strand 8	B	192	198	anti-parallel
Strand 9	B	179	182	anti-parallel
Strand 10	B	173	176	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	28	first strand
Strand 2	B	33	38	anti-parallel
Strand 3	B	43	47	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	56	first strand
Strand 2	B	142	155	anti-parallel
Strand 3	B	71	76	anti-parallel
Strand 4	B	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	56	first strand
Strand 2	B	142	155	anti-parallel
Strand 3	B	240	250	anti-parallel
Strand 4	B	204	208	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	275	first strand
Strand 2	B	278	279	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	315	318	first strand
Strand 2	B	754	760	anti-parallel
Strand 3	B	765	771	anti-parallel
Strand 4	B	803	809	parallel
Strand 5	B	782	785	anti-parallel
Strand 6	B	788	790	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	358	first strand
Strand 2	B	397	399	anti-parallel
Strand 3	B	404	405	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	440	443	first strand
Strand 2	B	446	452	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	510	511	first strand
Strand 2	B	565	566	anti-parallel
Strand 3	B	572	573	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	583	584	first strand
Strand 2	B	623	624	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	615	616	first strand
Strand 2	B	619	620	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	698	701	first strand
Strand 2	B	712	715	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	735	738	first strand
Strand 2	B	741	744	anti-parallel
Strand 3	B	794	795	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HO7

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HO7