Analysis of interatomic Contacts of Structural Units in PDB entry:
8HOK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HOK entry

There is 1 chain in PDB entry 8HOK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLY 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8HOK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 31Right-handed alpha
Helix 2
AA2
A
46 59Right-handed alpha
Helix 3
AA3
A
78 96Right-handed alpha
Helix 4
AA4
A
110 112Right-handed 310
Helix 5
AA5
A
113 120Right-handed alpha
Helix 6
AA6
A
131 148Right-handed alpha
Helix 7
AA7
A
151 156Right-handed 310
Helix 8
AA8
A
174 176Right-handed 310
Helix 9
AA9
A
177 181Right-handed 310
Helix 10
AB1
A
183 195Right-handed alpha
Helix 11
AB2
A
196 200Right-handed 310
Helix 12
AB3
A
212 222Right-handed alpha
Helix 13
AB4
A
246 255Right-handed alpha
Helix 14
AB5
A
273 288Right-handed alpha
Helix 15
AB6
A
304 313Right-handed alpha
Helix 16
AB7
A
316 321Right-handed alpha
Helix 17
AB8
A
332 339Right-handed alpha
Helix 18
AB9
A
350 360Right-handed alpha
Helix 19
AC1
A
372 383Right-handed alpha
Helix 20
AC2
A
408 421Right-handed alpha
Helix 21
AC3
A
424 441Right-handed alpha
Helix 22
AC4
A
445 462Right-handed alpha
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There are 3 sheets in PDB entry 8HOK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 71first strand
Strand 2
A
34 41parallel
Strand 3
A
4 9parallel
Strand 4
A
100 107parallel
Strand 5
A
124 128parallel
Strand 6
A
203 205parallel
Strand 7
A
228 230parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
171 172anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 328first strand
Strand 2
A
290 294parallel
Strand 3
A
261 265parallel
Strand 4
A
342 347parallel
Strand 5
A
364 366parallel
Strand 6
A
387 389parallel
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