Analysis of interatomic Contacts of Structural Units in PDB entry:
8HP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HP0 entry

There are 3 chains in PDB entry 8HP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2VAL 299
B
 LYS 2VAL 299
C
 LYS 2VAL 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 8HP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 25Right-handed alpha
Helix 2
AA2
A
43 47Right-handed 310
Helix 3
AA3
A
54 58Right-handed 310
Helix 4
AA4
A
69 71Right-handed 310
Helix 5
AA5
A
72 81Right-handed alpha
Helix 6
AA6
A
82 84Right-handed 310
Helix 7
AA7
A
93 95Right-handed 310
Helix 8
AA8
A
96 111Right-handed alpha
Helix 9
AA9
A
124 137Right-handed alpha
Helix 10
AB1
A
151 160Right-handed alpha
Helix 11
AB2
A
192 203Right-handed alpha
Helix 12
AB3
A
203 208Right-handed alpha
Helix 13
AB4
A
219 223Right-handed 310
Helix 14
AB5
A
253 269Right-handed alpha
Helix 15
AB6
A
277 281Right-handed 310
Helix 16
AB7
A
282 287Right-handed 310
Helix 17
AB8
A
290 299Right-handed alpha
Helix 18
AB9
B
12 25Right-handed alpha
Helix 19
AC1
B
43 47Right-handed 310
Helix 20
AC2
B
54 58Right-handed 310
Helix 21
AC3
B
69 71Right-handed 310
Helix 22
AC4
B
72 81Right-handed alpha
Helix 23
AC5
B
82 84Right-handed 310
Helix 24
AC6
B
93 95Right-handed 310
Helix 25
AC7
B
96 111Right-handed alpha
Helix 26
AC8
B
124 137Right-handed alpha
Helix 27
AC9
B
151 160Right-handed alpha
Helix 28
AD1
B
192 203Right-handed alpha
Helix 29
AD2
B
203 208Right-handed alpha
Helix 30
AD3
B
219 223Right-handed 310
Helix 31
AD4
B
253 269Right-handed alpha
Helix 32
AD5
B
277 281Right-handed 310
Helix 33
AD6
B
282 287Right-handed 310
Helix 34
AD7
B
290 299Right-handed alpha
Helix 35
AD8
C
12 25Right-handed alpha
Helix 36
AD9
C
43 47Right-handed 310
Helix 37
AE1
C
54 58Right-handed 310
Helix 38
AE2
C
69 71Right-handed 310
Helix 39
AE3
C
72 81Right-handed alpha
Helix 40
AE4
C
82 84Right-handed 310
Helix 41
AE5
C
93 95Right-handed 310
Helix 42
AE6
C
96 111Right-handed alpha
Helix 43
AE7
C
124 137Right-handed alpha
Helix 44
AE8
C
151 160Right-handed alpha
Helix 45
AE9
C
192 203Right-handed alpha
Helix 46
AF1
C
203 208Right-handed alpha
Helix 47
AF2
C
219 223Right-handed 310
Helix 48
AF3
C
253 269Right-handed alpha
Helix 49
AF4
C
277 281Right-handed 310
Helix 50
AF5
C
282 287Right-handed 310
Helix 51
AF6
C
290 299Right-handed alpha
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There are 8 sheets in PDB entry 8HP0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
28 34parallel
Strand 3
A
4 9parallel
Strand 4
A
63 66parallel
Strand 5
A
86 89parallel
Strand 6
A
114 116parallel
Strand 7
A
274 276parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 146first strand
Strand 2
A
226 237anti-parallel
Strand 3
A
240 252anti-parallel
Strand 4
B
240 252anti-parallel
Strand 5
B
226 237anti-parallel
Strand 6
B
139 146anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
164 173anti-parallel
Strand 3
A
179 187anti-parallel
Strand 4
A
210 215parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
28 34parallel
Strand 3
B
4 9parallel
Strand 4
B
63 66parallel
Strand 5
B
86 89parallel
Strand 6
B
114 116parallel
Strand 7
B
274 276parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
164 173anti-parallel
Strand 3
B
179 187anti-parallel
Strand 4
B
210 215parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
50 52first strand
Strand 2
C
28 34parallel
Strand 3
C
4 9parallel
Strand 4
C
63 66parallel
Strand 5
C
86 89parallel
Strand 6
C
114 116parallel
Strand 7
C
274 276parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 146first strand
Strand 2
C
226 237anti-parallel
Strand 3
C
240 252anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
149 150first strand
Strand 2
C
164 173anti-parallel
Strand 3
C
179 187anti-parallel
Strand 4
C
210 215parallel
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