Analysis of interatomic Contacts of Structural Units in PDB entry:
8HP7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HP7 entry

There are 3 chains in PDB entry 8HP7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 241
B
 MET 1GLY 241
C
 MET 1GLY 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 8HP7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 6Right-handed 310
Helix 2
AA2
A
19 36Right-handed alpha
Helix 3
AA3
A
40 59Right-handed alpha
Helix 4
AA4
A
63 80Right-handed alpha
Helix 5
AA5
A
84 94Right-handed alpha
Helix 6
AA6
A
95 98Right-handed 310
Helix 7
AA7
A
103 113Right-handed alpha
Helix 8
AA8
A
124 136Right-handed alpha
Helix 9
AA9
A
145 149Right-handed alpha
Helix 10
AB1
A
154 165Right-handed alpha
Helix 11
AB2
A
166 169Right-handed 310
Helix 12
AB3
A
171 173Right-handed 310
Helix 13
AB4
A
185 192Right-handed alpha
Helix 14
AB5
A
226 241Right-handed alpha
Helix 15
AB6
B
2 6Right-handed 310
Helix 16
AB7
B
19 28Right-handed alpha
Helix 17
AB8
B
28 36Right-handed alpha
Helix 18
AB9
B
40 59Right-handed alpha
Helix 19
AC1
B
63 80Right-handed alpha
Helix 20
AC2
B
84 94Right-handed alpha
Helix 21
AC3
B
95 98Right-handed 310
Helix 22
AC4
B
103 113Right-handed alpha
Helix 23
AC5
B
124 136Right-handed alpha
Helix 24
AC6
B
145 149Right-handed alpha
Helix 25
AC7
B
154 165Right-handed alpha
Helix 26
AC8
B
166 169Right-handed 310
Helix 27
AC9
B
171 173Right-handed 310
Helix 28
AD1
B
185 192Right-handed alpha
Helix 29
AD2
B
226 241Right-handed alpha
Helix 30
AD3
C
2 6Right-handed 310
Helix 31
AD4
C
19 28Right-handed alpha
Helix 32
AD5
C
28 36Right-handed alpha
Helix 33
AD6
C
40 59Right-handed alpha
Helix 34
AD7
C
63 80Right-handed alpha
Helix 35
AD8
C
84 94Right-handed alpha
Helix 36
AD9
C
95 98Right-handed 310
Helix 37
AE1
C
103 113Right-handed alpha
Helix 38
AE2
C
124 136Right-handed alpha
Helix 39
AE3
C
145 149Right-handed alpha
Helix 40
AE4
C
154 165Right-handed alpha
Helix 41
AE5
C
166 169Right-handed 310
Helix 42
AE6
C
171 173Right-handed 310
Helix 43
AE7
C
185 192Right-handed alpha
Helix 44
AE8
C
226 241Right-handed alpha
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There are 3 sheets in PDB entry 8HP7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 144first strand
Strand 2
A
116 121parallel
Strand 3
A
8 11parallel
Strand 4
A
175 179parallel
Strand 5
A
195 199parallel
Strand 6
A
222 224parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 144first strand
Strand 2
B
116 121parallel
Strand 3
B
8 11parallel
Strand 4
B
175 179parallel
Strand 5
B
195 199parallel
Strand 6
B
222 224parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
141 144first strand
Strand 2
C
116 121parallel
Strand 3
C
8 11parallel
Strand 4
C
175 179parallel
Strand 5
C
195 199parallel
Strand 6
C
222 224parallel
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