Analysis of interatomic Contacts of Structural Units in PDB entry:
8HPP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HPP entry

There are 3 chains in PDB entry 8HPP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 572TYR 976
B
 ASP 572TYR 976
C
 PRO 815HIS 900
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 8HPP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
575 580Right-handed alpha
Helix 2
AA2
A
583 588Right-handed alpha
Helix 3
AA3
A
590 604Right-handed alpha
Helix 4
AA4
A
614 627Right-handed alpha
Helix 5
AA5
A
640 648Right-handed alpha
Helix 6
AA6
A
650 661Right-handed alpha
Helix 7
AA7
A
668 680Right-handed alpha
Helix 8
AA8
A
685 697Right-handed alpha
Helix 9
AA9
A
704 712Right-handed alpha
Helix 10
AB1
A
718 734Right-handed alpha
Helix 11
AB2
A
734 749Right-handed alpha
Helix 12
AB3
A
749 754Right-handed alpha
Helix 13
AB4
A
757 764Right-handed alpha
Helix 14
AB5
A
768 782Right-handed alpha
Helix 15
AB6
A
788 800Right-handed alpha
Helix 16
AB7
A
803 818Right-handed alpha
Helix 17
AB8
A
824 830Right-handed 310
Helix 18
AB9
A
836 848Right-handed alpha
Helix 19
AC1
A
853 863Right-handed alpha
Helix 20
AC2
A
870 883Right-handed alpha
Helix 21
AC3
A
883 900Right-handed alpha
Helix 22
AC4
A
913 934Right-handed alpha
Helix 23
AC5
A
935 937Right-handed 310
Helix 24
AC6
A
944 956Right-handed alpha
Helix 25
AC7
A
961 965Right-handed 310
Helix 26
AC8
A
966 972Right-handed alpha
Helix 27
AC9
B
591 596Right-handed alpha
Helix 28
AD1
B
598 604Right-handed alpha
Helix 29
AD2
B
619 624Right-handed alpha
Helix 30
AD3
B
626 631Right-handed alpha
Helix 31
AD4
B
640 649Right-handed alpha
Helix 32
AD5
B
650 652Right-handed 310
Helix 33
AD6
B
653 662Right-handed alpha
Helix 34
AD7
B
667 683Right-handed alpha
Helix 35
AD8
B
685 697Right-handed alpha
Helix 36
AD9
B
704 714Right-handed alpha
Helix 37
AE1
B
718 734Right-handed alpha
Helix 38
AE2
B
734 749Right-handed alpha
Helix 39
AE3
B
749 754Right-handed alpha
Helix 40
AE4
B
757 764Right-handed alpha
Helix 41
AE5
B
768 781Right-handed alpha
Helix 42
AE6
B
788 800Right-handed alpha
Helix 43
AE7
B
803 816Right-handed alpha
Helix 44
AE8
B
820 831Right-handed 310
Helix 45
AE9
B
836 848Right-handed alpha
Helix 46
AF1
B
853 863Right-handed alpha
Helix 47
AF2
B
870 901Right-handed alpha
Helix 48
AF3
B
914 935Right-handed alpha
Helix 49
AF4
B
944 954Right-handed alpha
Helix 50
AF5
B
959 964Right-handed alpha
Helix 51
AF6
B
966 971Right-handed alpha
Helix 52
AF7
B
972 974Right-handed 310
Helix 53
AF8
C
817 836Right-handed alpha
Helix 54
AF9
C
842 850Right-handed alpha
Helix 55
AG1
C
855 873Right-handed alpha
Helix 56
AG2
C
875 900Right-handed alpha
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There are no sheets in PDB entry 8HPP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il