Analysis of interatomic Contacts of Structural Units in PDB entry:
8HR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HR6 entry

There are 2 chains in PDB entry 8HR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4ARG 365
B
 LEU 3ARG 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8HR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 12Right-handed alpha
Helix 2
AA2
A
52 74Right-handed alpha
Helix 3
AA3
A
94 107Right-handed alpha
Helix 4
AA4
A
121 129Right-handed alpha
Helix 5
AA5
A
148 168Right-handed alpha
Helix 6
AA6
A
184 196Right-handed alpha
Helix 7
AA7
A
207 219Right-handed alpha
Helix 8
AA8
A
224 228Right-handed 310
Helix 9
AA9
A
268 278Right-handed alpha
Helix 10
AB1
A
284 289Right-handed alpha
Helix 11
AB2
A
290 303Right-handed alpha
Helix 12
AB3
A
304 314Right-handed alpha
Helix 13
AB4
A
314 329Right-handed alpha
Helix 14
AB5
A
332 352Right-handed alpha
Helix 15
AB6
A
361 365Right-handed 310
Helix 16
AB7
B
4 12Right-handed alpha
Helix 17
AB8
B
52 74Right-handed alpha
Helix 18
AB9
B
94 107Right-handed alpha
Helix 19
AC1
B
121 129Right-handed alpha
Helix 20
AC2
B
149 169Right-handed alpha
Helix 21
AC3
B
184 196Right-handed alpha
Helix 22
AC4
B
207 218Right-handed alpha
Helix 23
AC5
B
224 228Right-handed 310
Helix 24
AC6
B
268 278Right-handed alpha
Helix 25
AC7
B
284 289Right-handed alpha
Helix 26
AC8
B
290 303Right-handed alpha
Helix 27
AC9
B
304 314Right-handed alpha
Helix 28
AD1
B
314 329Right-handed alpha
Helix 29
AD2
B
332 352Right-handed alpha
Helix 30
AD3
B
361 365Right-handed 310
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There are 5 sheets in PDB entry 8HR6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
79 86parallel
Strand 3
A
27 35anti-parallel
Strand 4
A
16 22anti-parallel
Strand 5
B
16 22anti-parallel
Strand 6
B
27 35anti-parallel
Strand 7
B
79 86anti-parallel
Strand 8
B
45 48parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
41 42parallel
Strand 3
A
79 86parallel
Strand 4
A
27 35anti-parallel
Strand 5
A
16 22anti-parallel
Strand 6
B
16 22anti-parallel
Strand 7
B
27 35anti-parallel
Strand 8
B
79 86anti-parallel
Strand 9
B
41 42parallel
Strand 10
B
112 113parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 222first strand
Strand 2
A
200 204parallel
Strand 3
A
177 181parallel
Strand 4
A
235 238parallel
Strand 5
A
257 258parallel
Strand 6
A
281 282parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 222first strand
Strand 2
B
200 204parallel
Strand 3
B
177 181parallel
Strand 4
B
235 238parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 258first strand
Strand 2
B
281 282parallel
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