Analysis of interatomic Contacts of Structural Units in PDB entry:
8HS8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HS8 entry

There are 4 chains in PDB entry 8HS8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 250GLY 451
B
 LEU 247GLY 451
D
 MET 1PHE 88
C
 MET 1PHE 88
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8HS8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
272 287Right-handed alpha
Helix 2
AA2
A
299 308Right-handed alpha
Helix 3
AA3
A
308 313Right-handed alpha
Helix 4
AA4
A
318 326Right-handed alpha
Helix 5
AA5
A
351 364Right-handed alpha
Helix 6
AA6
A
376 390Right-handed alpha
Helix 7
AA7
A
392 401Right-handed alpha
Helix 8
AA8
A
405 416Right-handed alpha
Helix 9
AA9
A
426 438Right-handed alpha
Helix 10
AB1
A
441 450Right-handed alpha
Helix 11
AB2
B
272 287Right-handed alpha
Helix 12
AB3
B
299 306Right-handed alpha
Helix 13
AB4
B
308 313Right-handed alpha
Helix 14
AB5
B
318 326Right-handed alpha
Helix 15
AB6
B
342 345Right-handed 310
Helix 16
AB7
B
351 364Right-handed alpha
Helix 17
AB8
B
376 390Right-handed alpha
Helix 18
AB9
B
392 400Right-handed alpha
Helix 19
AC1
B
405 416Right-handed alpha
Helix 20
AC2
B
426 438Right-handed alpha
Helix 21
AC3
B
441 450Right-handed alpha
Helix 22
AC4
D
13 19Right-handed alpha
Helix 23
AC5
D
24 44Right-handed alpha
Helix 24
AC6
D
46 51Right-handed alpha
Helix 25
AC7
D
55 85Right-handed alpha
Helix 26
AC8
C
7 12Right-handed alpha
Helix 27
AC9
C
13 20Right-handed alpha
Helix 28
AD1
C
21 23Right-handed 310
Helix 29
AD2
C
24 44Right-handed alpha
Helix 30
AD3
C
46 51Right-handed alpha
Helix 31
AD4
C
55 84Right-handed alpha
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There are 6 sheets in PDB entry 8HS8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 269first strand
Strand 2
A
421 425anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 297first strand
Strand 2
A
288 291anti-parallel
Strand 3
A
331 333anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 317first strand
Strand 2
A
347 349anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 269first strand
Strand 2
B
421 425anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
295 297first strand
Strand 2
B
288 290anti-parallel
Strand 3
B
332 333anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
316 317first strand
Strand 2
B
347 349anti-parallel
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