Analysis of interatomic Contacts of Structural Units in PDB entry:
8HSA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HSA entry

There are 8 chains in PDB entry 8HSA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	SER 54	GLN 301
A	SER 54	GLN 301
B	SER 54	GLN 301
C	SER 54	GLN 301
D	SER 54	GLN 301
E	SER 54	GLN 301
F	SER 54	GLN 301
H	SER 54	GLN 301

There are 84 helices in PDB entry 8HSA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	70	84	Right-handed alpha
Helix 2	AA2	G	93	107	Right-handed alpha
Helix 3	AA3	G	120	136	Right-handed alpha
Helix 4	AA4	G	156	167	Right-handed alpha
Helix 5	AA5	G	168	185	Right-handed alpha
Helix 6	AA6	G	195	199	Right-handed 310
Helix 7	AA7	G	205	227	Right-handed alpha
Helix 8	AA8	G	251	260	Right-handed alpha
Helix 9	AA9	G	270	282	Right-handed alpha
Helix 10	AB1	G	283	286	Right-handed 310
Helix 11	AB2	A	70	83	Right-handed alpha
Helix 12	AB3	A	93	107	Right-handed alpha
Helix 13	AB4	A	120	136	Right-handed alpha
Helix 14	AB5	A	156	168	Right-handed alpha
Helix 15	AB6	A	168	185	Right-handed alpha
Helix 16	AB7	A	205	227	Right-handed alpha
Helix 17	AB8	A	243	250	Right-handed alpha
Helix 18	AB9	A	251	259	Right-handed alpha
Helix 19	AC1	A	269	282	Right-handed alpha
Helix 20	AC2	A	283	286	Right-handed 310
Helix 21	AC3	B	70	83	Right-handed alpha
Helix 22	AC4	B	93	108	Right-handed alpha
Helix 23	AC5	B	120	136	Right-handed alpha
Helix 24	AC6	B	156	168	Right-handed alpha
Helix 25	AC7	B	168	185	Right-handed alpha
Helix 26	AC8	B	195	199	Right-handed 310
Helix 27	AC9	B	205	223	Right-handed alpha
Helix 28	AD1	B	243	248	Right-handed alpha
Helix 29	AD2	B	251	260	Right-handed alpha
Helix 30	AD3	B	269	282	Right-handed alpha
Helix 31	AD4	B	283	286	Right-handed 310
Helix 32	AD5	C	70	84	Right-handed alpha
Helix 33	AD6	C	93	107	Right-handed alpha
Helix 34	AD7	C	120	136	Right-handed alpha
Helix 35	AD8	C	156	168	Right-handed alpha
Helix 36	AD9	C	168	185	Right-handed alpha
Helix 37	AE1	C	195	199	Right-handed 310
Helix 38	AE2	C	205	227	Right-handed alpha
Helix 39	AE3	C	245	249	Right-handed 310
Helix 40	AE4	C	251	260	Right-handed alpha
Helix 41	AE5	C	270	282	Right-handed alpha
Helix 42	AE6	C	283	286	Right-handed 310
Helix 43	AE7	D	70	83	Right-handed alpha
Helix 44	AE8	D	93	107	Right-handed alpha
Helix 45	AE9	D	120	136	Right-handed alpha
Helix 46	AF1	D	156	168	Right-handed alpha
Helix 47	AF2	D	168	186	Right-handed alpha
Helix 48	AF3	D	195	199	Right-handed 310
Helix 49	AF4	D	205	227	Right-handed alpha
Helix 50	AF5	D	243	248	Right-handed alpha
Helix 51	AF6	D	253	259	Right-handed alpha
Helix 52	AF7	D	269	282	Right-handed alpha
Helix 53	AF8	D	283	286	Right-handed 310
Helix 54	AF9	E	70	84	Right-handed alpha
Helix 55	AG1	E	93	107	Right-handed alpha
Helix 56	AG2	E	120	136	Right-handed alpha
Helix 57	AG3	E	156	168	Right-handed alpha
Helix 58	AG4	E	168	185	Right-handed alpha
Helix 59	AG5	E	195	199	Right-handed 310
Helix 60	AG6	E	205	227	Right-handed alpha
Helix 61	AG7	E	252	260	Right-handed alpha
Helix 62	AG8	E	269	282	Right-handed alpha
Helix 63	AG9	E	283	286	Right-handed 310
Helix 64	AH1	F	70	83	Right-handed alpha
Helix 65	AH2	F	93	107	Right-handed alpha
Helix 66	AH3	F	120	136	Right-handed alpha
Helix 67	AH4	F	156	168	Right-handed alpha
Helix 68	AH5	F	168	185	Right-handed alpha
Helix 69	AH6	F	195	199	Right-handed 310
Helix 70	AH7	F	205	227	Right-handed alpha
Helix 71	AH8	F	243	250	Right-handed alpha
Helix 72	AH9	F	251	260	Right-handed alpha
Helix 73	AI1	F	269	282	Right-handed alpha
Helix 74	AI2	F	283	286	Right-handed 310
Helix 75	AI3	H	72	83	Right-handed alpha
Helix 76	AI4	H	93	108	Right-handed alpha
Helix 77	AI5	H	120	136	Right-handed alpha
Helix 78	AI6	H	156	168	Right-handed alpha
Helix 79	AI7	H	168	186	Right-handed alpha
Helix 80	AI8	H	195	199	Right-handed 310
Helix 81	AI9	H	205	226	Right-handed alpha
Helix 82	AJ1	H	257	261	Right-handed 310
Helix 83	AJ2	H	269	282	Right-handed alpha
Helix 84	AJ3	H	283	286	Right-handed 310

There are 9 sheets in PDB entry 8HSA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	111	115	first strand
Strand 2	G	85	91	parallel
Strand 3	G	61	66	parallel
Strand 4	G	140	143	parallel
Strand 5	G	188	193	parallel
Strand 6	G	231	238	parallel
Strand 7	G	292	295	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	115	first strand
Strand 2	A	86	91	parallel
Strand 3	A	62	65	parallel
Strand 4	A	140	143	parallel
Strand 5	A	188	193	parallel
Strand 6	A	231	238	parallel
Strand 7	A	291	295	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	115	first strand
Strand 2	B	85	91	parallel
Strand 3	B	61	65	parallel
Strand 4	B	140	143	parallel
Strand 5	B	188	193	parallel
Strand 6	B	231	238	parallel
Strand 7	B	292	295	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	115	first strand
Strand 2	C	86	91	parallel
Strand 3	C	62	65	parallel
Strand 4	C	140	143	parallel
Strand 5	C	189	193	parallel
Strand 6	C	232	238	parallel
Strand 7	C	292	295	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	242	first strand
Strand 2	C	268	269	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	113	first strand
Strand 2	D	86	89	parallel
Strand 3	D	62	65	parallel
Strand 4	D	140	143	parallel
Strand 5	D	188	193	parallel
Strand 6	D	231	238	parallel
Strand 7	D	292	295	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	115	first strand
Strand 2	E	85	91	parallel
Strand 3	E	61	65	parallel
Strand 4	E	140	143	parallel
Strand 5	E	188	193	parallel
Strand 6	E	231	238	parallel
Strand 7	E	292	295	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	111	113	first strand
Strand 2	F	86	89	parallel
Strand 3	F	62	65	parallel
Strand 4	F	140	143	parallel
Strand 5	F	188	193	parallel
Strand 6	F	231	238	parallel
Strand 7	F	292	295	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	111	113	first strand
Strand 2	H	85	89	parallel
Strand 3	H	61	65	parallel
Strand 4	H	140	143	parallel
Strand 5	H	188	193	parallel
Strand 6	H	231	238	parallel
Strand 7	H	292	295	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HSA

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HSA