Analysis of interatomic Contacts of Structural Units in PDB entry:
8HT0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HT0 entry

There is 1 chain in PDB entry 8HT0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLU 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8HT0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed alpha
Helix 2
AA2
A
33 40Right-handed alpha
Helix 3
AA3
A
45 49Right-handed 310
Helix 4
AA4
A
60 72Right-handed alpha
Helix 5
AA5
A
81 86Right-handed alpha
Helix 6
AA6
A
94 111Right-handed alpha
Helix 7
AA7
A
125 131Right-handed alpha
Helix 8
AA8
A
132 135Right-handed 310
Helix 9
AA9
A
136 155Right-handed alpha
Helix 10
AB1
A
166 176Right-handed alpha
Helix 11
AB2
A
186 211Right-handed alpha
Helix 12
AB3
A
232 245Right-handed alpha
Helix 13
AB4
A
247 257Right-handed alpha
Helix 14
AB5
A
260 270Right-handed alpha
Helix 15
AB6
A
279 285Right-handed alpha
Helix 16
AB7
A
329 345Right-handed alpha
Helix 17
AB8
A
369 390Right-handed alpha
Helix 18
AB9
A
406 413Right-handed 310
Helix 19
AC1
A
430 443Right-handed alpha
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There are 4 sheets in PDB entry 8HT0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
444 445anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 220first strand
Strand 2
A
160 165parallel
Strand 3
A
114 120parallel
Strand 4
A
75 79parallel
Strand 5
A
11 15parallel
Strand 6
A
393 399parallel
Strand 7
A
349 354parallel
Strand 8
A
291 303parallel
Strand 9
A
222 228parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 220first strand
Strand 2
A
160 165parallel
Strand 3
A
114 120parallel
Strand 4
A
75 79parallel
Strand 5
A
11 15parallel
Strand 6
A
393 399parallel
Strand 7
A
349 354parallel
Strand 8
A
291 303parallel
Strand 9
A
312 315anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 420first strand
Strand 2
A
427 429anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il