Analysis of interatomic Contacts of Structural Units in PDB entry:
8HT4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HT4 entry

There are 2 chains in PDB entry 8HT4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3ALA 391
B
 SER 2ALA 391
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 8HT4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 47Right-handed alpha
Helix 2
AA2
A
54 66Right-handed alpha
Helix 3
AA3
A
77 93Right-handed alpha
Helix 4
AA4
A
95 101Right-handed alpha
Helix 5
AA5
A
109 124Right-handed alpha
Helix 6
AA6
A
140 147Right-handed alpha
Helix 7
AA7
A
149 154Right-handed alpha
Helix 8
AA8
A
155 157Right-handed 310
Helix 9
AA9
A
170 180Right-handed alpha
Helix 10
AB1
A
181 183Right-handed 310
Helix 11
AB2
A
205 216Right-handed alpha
Helix 12
AB3
A
217 219Right-handed 310
Helix 13
AB4
A
237 243Right-handed 310
Helix 14
AB5
A
252 257Right-handed 310
Helix 15
AB6
A
268 274Right-handed alpha
Helix 16
AB7
A
286 300Right-handed alpha
Helix 17
AB8
A
301 320Right-handed alpha
Helix 18
AB9
A
343 352Right-handed alpha
Helix 19
AC1
A
375 391Right-handed alpha
Helix 20
AC2
B
3 11Right-handed alpha
Helix 21
AC3
B
42 47Right-handed alpha
Helix 22
AC4
B
54 66Right-handed alpha
Helix 23
AC5
B
77 93Right-handed alpha
Helix 24
AC6
B
95 101Right-handed alpha
Helix 25
AC7
B
109 123Right-handed alpha
Helix 26
AC8
B
140 146Right-handed alpha
Helix 27
AC9
B
149 154Right-handed alpha
Helix 28
AD1
B
155 157Right-handed 310
Helix 29
AD2
B
170 180Right-handed alpha
Helix 30
AD3
B
181 183Right-handed 310
Helix 31
AD4
B
205 218Right-handed alpha
Helix 32
AD5
B
237 243Right-handed 310
Helix 33
AD6
B
252 257Right-handed 310
Helix 34
AD7
B
268 273Right-handed alpha
Helix 35
AD8
B
286 300Right-handed alpha
Helix 36
AD9
B
301 321Right-handed alpha
Helix 37
AE1
B
343 354Right-handed alpha
Helix 38
AE2
B
375 391Right-handed alpha
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There are 8 sheets in PDB entry 8HT4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 26first strand
Strand 2
A
29 32anti-parallel
Strand 3
A
37 40anti-parallel
Strand 4
A
356 357parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 107first strand
Strand 2
A
262 267anti-parallel
Strand 3
A
248 251anti-parallel
Strand 4
A
220 224parallel
Strand 5
A
185 190parallel
Strand 6
A
128 132parallel
Strand 7
A
163 166parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
200 201anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 331first strand
Strand 2
A
334 339anti-parallel
Strand 3
A
365 368anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 26first strand
Strand 2
B
29 32anti-parallel
Strand 3
B
37 40anti-parallel
Strand 4
B
356 357parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 107first strand
Strand 2
B
262 267anti-parallel
Strand 3
B
248 251anti-parallel
Strand 4
B
220 224parallel
Strand 5
B
185 190parallel
Strand 6
B
128 132parallel
Strand 7
B
163 166parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 194first strand
Strand 2
B
200 201anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 331first strand
Strand 2
B
334 339anti-parallel
Strand 3
B
365 368anti-parallel
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