Analysis of interatomic Contacts of Structural Units in PDB entry:
8HTW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HTW entry

There are 2 chains in PDB entry 8HTW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 0ILE 178
B
 GLY -2GLU 177
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8HTW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 25Right-handed alpha
Helix 2
AA2
A
39 57Right-handed alpha
Helix 3
AA3
A
78 93Right-handed alpha
Helix 4
AA4
A
105 118Right-handed alpha
Helix 5
AA5
A
129 143Right-handed alpha
Helix 6
AA6
A
151 155Right-handed 310
Helix 7
AA7
A
156 165Right-handed alpha
Helix 8
AA8
B
14 25Right-handed alpha
Helix 9
AA9
B
39 57Right-handed alpha
Helix 10
AB1
B
78 93Right-handed alpha
Helix 11
AB2
B
105 118Right-handed alpha
Helix 12
AB3
B
129 142Right-handed alpha
Helix 13
AB4
B
151 155Right-handed 310
Helix 14
AB5
B
156 164Right-handed alpha
Helix 15
AB6
B
165 167Right-handed 310
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There are 2 sheets in PDB entry 8HTW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 71first strand
Strand 2
A
29 37parallel
Strand 3
A
2 7parallel
Strand 4
A
98 100parallel
Strand 5
A
122 127parallel
Strand 6
A
172 175anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 70first strand
Strand 2
B
29 36parallel
Strand 3
B
2 7parallel
Strand 4
B
98 100parallel
Strand 5
B
122 127parallel
Strand 6
B
172 175anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il