Analysis of interatomic Contacts of Structural Units in PDB entry:
8HU6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HU6 entry

There are 4 chains in PDB entry 8HU6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 218	LEU 863
B	GLU 218	LEU 863
C	GLU 216	THR 865
D	GLU 218	GLU 869

There are136 helices in PDB entry 8HU6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	233	258	Right-handed alpha
Helix 2	AA2	A	263	272	Right-handed alpha
Helix 3	AA3	A	311	315	Right-handed 310
Helix 4	AA4	A	351	366	Right-handed alpha
Helix 5	AA5	A	368	404	Right-handed alpha
Helix 6	AA6	A	408	412	Right-handed 310
Helix 7	AA7	A	422	424	Right-handed 310
Helix 8	AA8	A	426	439	Right-handed alpha
Helix 9	AA9	A	456	463	Right-handed alpha
Helix 10	AB1	A	471	476	Right-handed alpha
Helix 11	AB2	A	480	484	Right-handed 310
Helix 12	AB3	A	486	493	Right-handed alpha
Helix 13	AB4	A	494	498	Right-handed 310
Helix 14	AB5	A	499	507	Right-handed alpha
Helix 15	AB6	A	515	533	Right-handed alpha
Helix 16	AB7	A	549	562	Right-handed alpha
Helix 17	AB8	A	577	584	Right-handed alpha
Helix 18	AB9	A	589	607	Right-handed alpha
Helix 19	AC1	A	608	610	Right-handed 310
Helix 20	AC2	A	611	618	Right-handed alpha
Helix 21	AC3	A	655	678	Right-handed alpha
Helix 22	AC4	A	695	704	Right-handed alpha
Helix 23	AC5	A	711	715	Right-handed 310
Helix 24	AC6	A	716	727	Right-handed alpha
Helix 25	AC7	A	733	739	Right-handed alpha
Helix 26	AC8	A	743	747	Right-handed 310
Helix 27	AC9	A	748	756	Right-handed alpha
Helix 28	AD1	A	765	770	Right-handed alpha
Helix 29	AD2	A	774	788	Right-handed alpha
Helix 30	AD3	A	790	805	Right-handed alpha
Helix 31	AD4	A	808	817	Right-handed alpha
Helix 32	AD5	A	823	828	Right-handed 310
Helix 33	AD6	A	829	834	Right-handed alpha
Helix 34	AD7	A	836	863	Right-handed alpha
Helix 35	AD8	B	233	259	Right-handed alpha
Helix 36	AD9	B	263	274	Right-handed alpha
Helix 37	AE1	B	311	315	Right-handed 310
Helix 38	AE2	B	351	366	Right-handed alpha
Helix 39	AE3	B	368	404	Right-handed alpha
Helix 40	AE4	B	408	412	Right-handed 310
Helix 41	AE5	B	422	424	Right-handed 310
Helix 42	AE6	B	426	438	Right-handed alpha
Helix 43	AE7	B	456	463	Right-handed alpha
Helix 44	AE8	B	471	476	Right-handed alpha
Helix 45	AE9	B	480	484	Right-handed 310
Helix 46	AF1	B	486	493	Right-handed alpha
Helix 47	AF2	B	494	498	Right-handed 310
Helix 48	AF3	B	499	507	Right-handed alpha
Helix 49	AF4	B	515	533	Right-handed alpha
Helix 50	AF5	B	549	562	Right-handed alpha
Helix 51	AF6	B	577	584	Right-handed alpha
Helix 52	AF7	B	589	607	Right-handed alpha
Helix 53	AF8	B	608	610	Right-handed 310
Helix 54	AF9	B	611	618	Right-handed alpha
Helix 55	AG1	B	655	678	Right-handed alpha
Helix 56	AG2	B	694	704	Right-handed alpha
Helix 57	AG3	B	711	715	Right-handed 310
Helix 58	AG4	B	716	727	Right-handed alpha
Helix 59	AG5	B	733	739	Right-handed alpha
Helix 60	AG6	B	743	747	Right-handed 310
Helix 61	AG7	B	748	756	Right-handed alpha
Helix 62	AG8	B	765	770	Right-handed alpha
Helix 63	AG9	B	774	788	Right-handed alpha
Helix 64	AH1	B	790	804	Right-handed alpha
Helix 65	AH2	B	808	817	Right-handed alpha
Helix 66	AH3	B	823	828	Right-handed 310
Helix 67	AH4	B	829	834	Right-handed alpha
Helix 68	AH5	B	836	863	Right-handed alpha
Helix 69	AH6	C	233	258	Right-handed alpha
Helix 70	AH7	C	263	272	Right-handed alpha
Helix 71	AH8	C	311	315	Right-handed 310
Helix 72	AH9	C	351	366	Right-handed alpha
Helix 73	AI1	C	368	404	Right-handed alpha
Helix 74	AI2	C	408	412	Right-handed 310
Helix 75	AI3	C	422	424	Right-handed 310
Helix 76	AI4	C	426	441	Right-handed alpha
Helix 77	AI5	C	456	463	Right-handed alpha
Helix 78	AI6	C	471	476	Right-handed alpha
Helix 79	AI7	C	480	484	Right-handed 310
Helix 80	AI8	C	486	493	Right-handed alpha
Helix 81	AI9	C	494	498	Right-handed 310
Helix 82	AJ1	C	499	508	Right-handed alpha
Helix 83	AJ2	C	515	533	Right-handed alpha
Helix 84	AJ3	C	549	562	Right-handed alpha
Helix 85	AJ4	C	577	584	Right-handed alpha
Helix 86	AJ5	C	589	607	Right-handed alpha
Helix 87	AJ6	C	608	610	Right-handed 310
Helix 88	AJ7	C	611	618	Right-handed alpha
Helix 89	AJ8	C	655	677	Right-handed alpha
Helix 90	AJ9	C	695	704	Right-handed alpha
Helix 91	AK1	C	711	715	Right-handed 310
Helix 92	AK2	C	716	727	Right-handed alpha
Helix 93	AK3	C	733	739	Right-handed alpha
Helix 94	AK4	C	748	756	Right-handed alpha
Helix 95	AK5	C	765	770	Right-handed alpha
Helix 96	AK6	C	774	787	Right-handed alpha
Helix 97	AK7	C	790	804	Right-handed alpha
Helix 98	AK8	C	808	817	Right-handed alpha
Helix 99	AK9	C	823	828	Right-handed 310
Helix 100	AL1	C	829	834	Right-handed alpha
Helix 101	AL2	C	836	860	Right-handed alpha
Helix 102	AL3	D	233	258	Right-handed alpha
Helix 103	AL4	D	263	274	Right-handed alpha
Helix 104	AL5	D	311	315	Right-handed 310
Helix 105	AL6	D	351	366	Right-handed alpha
Helix 106	AL7	D	368	404	Right-handed alpha
Helix 107	AL8	D	408	412	Right-handed 310
Helix 108	AL9	D	422	424	Right-handed 310
Helix 109	AM1	D	426	441	Right-handed alpha
Helix 110	AM2	D	456	463	Right-handed alpha
Helix 111	AM3	D	471	476	Right-handed alpha
Helix 112	AM4	D	480	484	Right-handed 310
Helix 113	AM5	D	486	493	Right-handed alpha
Helix 114	AM6	D	494	498	Right-handed 310
Helix 115	AM7	D	499	508	Right-handed alpha
Helix 116	AM8	D	515	533	Right-handed alpha
Helix 117	AM9	D	549	562	Right-handed alpha
Helix 118	AN1	D	577	584	Right-handed alpha
Helix 119	AN2	D	589	607	Right-handed alpha
Helix 120	AN3	D	608	610	Right-handed 310
Helix 121	AN4	D	611	618	Right-handed alpha
Helix 122	AN5	D	644	648	Right-handed 310
Helix 123	AN6	D	655	677	Right-handed alpha
Helix 124	AN7	D	694	704	Right-handed alpha
Helix 125	AN8	D	711	715	Right-handed 310
Helix 126	AN9	D	716	726	Right-handed alpha
Helix 127	AO1	D	733	741	Right-handed alpha
Helix 128	AO2	D	743	747	Right-handed 310
Helix 129	AO3	D	748	756	Right-handed alpha
Helix 130	AO4	D	765	770	Right-handed alpha
Helix 131	AO5	D	774	787	Right-handed alpha
Helix 132	AO6	D	790	805	Right-handed alpha
Helix 133	AO7	D	808	817	Right-handed alpha
Helix 134	AO8	D	823	828	Right-handed 310
Helix 135	AO9	D	829	834	Right-handed alpha
Helix 136	AP1	D	836	869	Right-handed alpha

There are 18 sheets in PDB entry 8HU6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	225	first strand
Strand 2	D	221	225	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	326	first strand
Strand 2	A	329	333	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	420	first strand
Strand 2	A	535	542	parallel
Strand 3	A	568	575	parallel
Strand 4	A	621	627	parallel
Strand 5	A	683	684	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	448	first strand
Strand 2	A	453	455	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	687	688	first strand
Strand 2	A	706	709	parallel
Strand 3	A	729	732	parallel
Strand 4	A	759	761	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	221	225	first strand
Strand 2	C	221	225	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	322	326	first strand
Strand 2	B	329	333	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	420	first strand
Strand 2	B	535	542	parallel
Strand 3	B	568	575	parallel
Strand 4	B	621	627	parallel
Strand 5	B	683	684	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	449	first strand
Strand 2	B	452	455	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	687	688	first strand
Strand 2	B	707	709	parallel
Strand 3	B	730	732	parallel
Strand 4	B	759	761	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	322	326	first strand
Strand 2	C	329	333	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	420	first strand
Strand 2	C	535	542	parallel
Strand 3	C	568	575	parallel
Strand 4	C	621	627	parallel
Strand 5	C	683	684	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	449	first strand
Strand 2	C	452	455	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	687	688	first strand
Strand 2	C	706	709	parallel
Strand 3	C	729	732	parallel
Strand 4	C	759	761	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	322	326	first strand
Strand 2	D	329	333	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	414	420	first strand
Strand 2	D	535	542	parallel
Strand 3	D	568	575	parallel
Strand 4	D	621	627	parallel
Strand 5	D	683	684	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	449	first strand
Strand 2	D	452	455	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	687	688	first strand
Strand 2	D	706	709	parallel
Strand 3	D	729	732	parallel
Strand 4	D	759	761	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HU6

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HU6