Analysis of interatomic Contacts of Structural Units in PDB entry:
8HUA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HUA entry

There are 3 chains in PDB entry 8HUA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9TRP 562
B
 VAL 2GLU 168
C
 LYS 4GLY 34
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8HUA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 15Right-handed alpha
Helix 2
AA2
A
16 37Right-handed alpha
Helix 3
AA3
A
38 46Right-handed alpha
Helix 4
AA4
A
51 59Right-handed alpha
Helix 5
AA5
A
64 78Right-handed alpha
Helix 6
AA6
A
78 98Right-handed alpha
Helix 7
AA7
A
102 126Right-handed alpha
Helix 8
AA8
A
142 173Right-handed alpha
Helix 9
AA9
A
180 197Right-handed alpha
Helix 10
AB1
A
197 207Right-handed alpha
Helix 11
AB2
A
207 213Right-handed alpha
Helix 12
AB3
A
220 233Right-handed alpha
Helix 13
AB4
A
233 250Right-handed alpha
Helix 14
AB5
A
250 255Right-handed alpha
Helix 15
AB6
A
261 276Right-handed alpha
Helix 16
AB7
A
279 284Right-handed 310
Helix 17
AB8
A
291 327Right-handed alpha
Helix 18
AB9
A
333 338Right-handed alpha
Helix 19
AC1
A
343 368Right-handed alpha
Helix 20
AC2
A
371 376Right-handed alpha
Helix 21
AC3
A
379 389Right-handed alpha
Helix 22
AC4
A
391 401Right-handed alpha
Helix 23
AC5
A
403 410Right-handed alpha
Helix 24
AC6
A
414 445Right-handed alpha
Helix 25
AC7
A
452 456Right-handed 310
Helix 26
AC8
A
460 462Right-handed 310
Helix 27
AC9
A
463 494Right-handed alpha
Helix 28
AD1
A
498 503Right-handed alpha
Helix 29
AD2
A
516 525Right-handed alpha
Helix 30
AD3
A
526 552Right-handed alpha
Helix 31
AD4
B
3 37Right-handed alpha
Helix 32
AD5
B
38 45Right-handed 310
Helix 33
AD6
B
66 69Right-handed 310
Helix 34
AD7
B
156 159Right-handed 310
Helix 35
AD8
C
5 33Right-handed alpha
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There are 4 sheets in PDB entry 8HUA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
556 557anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 75first strand
Strand 2
B
78 86anti-parallel
Strand 3
B
89 91anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 75first strand
Strand 2
B
78 86anti-parallel
Strand 3
B
102 108parallel
Strand 4
B
133 138anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 98first strand
Strand 2
B
161 167parallel
Strand 3
B
143 148anti-parallel
Strand 4
B
114 118anti-parallel
Strand 5
B
124 127anti-parallel
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