Analysis of interatomic Contacts of Structural Units in PDB entry:
8HUE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HUE entry

There are 3 chains in PDB entry 8HUE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 20LYS 154
B
 PHE 26LYS 154
C
 HIS 25LYS 154
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8HUE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 27Right-handed 310
Helix 2
AA2
A
57 60Right-handed 310
Helix 3
AA3
A
98 101Right-handed 310
Helix 4
AA4
A
135 139Right-handed 310
Helix 5
AA5
A
143 146Right-handed 310
Helix 6
AA6
B
57 60Right-handed 310
Helix 7
AA7
B
98 101Right-handed 310
Helix 8
AA8
B
135 139Right-handed 310
Helix 9
AA9
B
143 146Right-handed 310
Helix 10
AB1
C
57 60Right-handed 310
Helix 11
AB2
C
98 101Right-handed 310
Helix 12
AB3
C
109 111Right-handed 310
Helix 13
AB4
C
135 139Right-handed 310
Helix 14
AB5
C
143 146Right-handed 310
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There are 11 sheets in PDB entry 8HUE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 52first strand
Strand 2
A
39 43anti-parallel
Strand 3
A
30 34anti-parallel
Strand 4
A
148 152anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 68first strand
Strand 2
A
71 76anti-parallel
Strand 3
A
81 85anti-parallel
Strand 4
A
91 94anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 68first strand
Strand 2
A
71 76anti-parallel
Strand 3
A
103 107anti-parallel
Strand 4
A
113 117anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
148 152anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 43first strand
Strand 2
B
49 52anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 68first strand
Strand 2
B
71 76anti-parallel
Strand 3
B
81 85anti-parallel
Strand 4
B
91 94anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 68first strand
Strand 2
B
71 76anti-parallel
Strand 3
B
103 107anti-parallel
Strand 4
B
113 117anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 34first strand
Strand 2
C
148 152anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 43first strand
Strand 2
C
49 52anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 68first strand
Strand 2
C
71 76anti-parallel
Strand 3
C
81 85anti-parallel
Strand 4
C
91 94anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 68first strand
Strand 2
C
71 76anti-parallel
Strand 3
C
103 107anti-parallel
Strand 4
C
113 117anti-parallel
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