Analysis of interatomic Contacts of Structural Units in PDB entry:
8HUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HUJ entry

There are 3 chains in PDB entry 8HUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 24ILE 406
B
 GLY 754VAL 991
C
 G 682 C 785
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8HUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 38Right-handed 310
Helix 2
AA2
A
40 51Right-handed alpha
Helix 3
AA3
A
56 62Right-handed alpha
Helix 4
AA4
A
63 69Right-handed alpha
Helix 5
AA5
A
81 94Right-handed alpha
Helix 6
AA6
A
110 123Right-handed alpha
Helix 7
AA7
A
139 150Right-handed alpha
Helix 8
AA8
A
158 167Right-handed alpha
Helix 9
AA9
A
183 191Right-handed alpha
Helix 10
AB1
A
192 203Right-handed alpha
Helix 11
AB2
A
217 228Right-handed alpha
Helix 12
AB3
A
242 246Right-handed 310
Helix 13
AB4
A
257 269Right-handed alpha
Helix 14
AB5
A
282 295Right-handed alpha
Helix 15
AB6
A
308 321Right-handed alpha
Helix 16
AB7
A
329 336Right-handed alpha
Helix 17
AB8
A
354 361Right-handed alpha
Helix 18
AB9
A
362 365Right-handed 310
Helix 19
AC1
A
377 379Right-handed 310
Helix 20
AC2
A
380 391Right-handed alpha
Helix 21
AC3
A
401 406Right-handed alpha
Helix 22
AC4
B
755 771Right-handed alpha
Helix 23
AC5
B
775 785Right-handed alpha
Helix 24
AC6
B
790 808Right-handed alpha
Helix 25
AC7
B
811 822Right-handed alpha
Helix 26
AC8
B
838 852Right-handed alpha
Helix 27
AC9
B
853 871Right-handed alpha
Helix 28
AD1
B
873 908Right-handed alpha
Helix 29
AD2
B
912 926Right-handed alpha
Helix 30
AD3
B
928 947Right-handed alpha
Helix 31
AD4
B
948 950Right-handed 310
Helix 32
AD5
B
951 969Right-handed alpha
Helix 33
AD6
B
972 988Right-handed alpha
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There are 3 sheets in PDB entry 8HUJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
154 156parallel
Strand 3
A
103 106parallel
Strand 4
A
178 182parallel
Strand 5
A
208 213parallel
Strand 6
A
72 75parallel
Strand 7
A
232 235parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 301first strand
Strand 2
A
325 328parallel
Strand 3
A
275 278parallel
Strand 4
A
343 346parallel
Strand 5
A
371 375parallel
Strand 6
A
247 251parallel
Strand 7
A
396 397parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
827 828first strand
Strand 2
B
836 837anti-parallel
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