Analysis of interatomic Contacts of Structural Units in PDB entry:
8HUZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HUZ entry

There are 6 chains in PDB entry 8HUZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	LEU 6	ASP 169
A	LEU 6	ASP 169
B	LEU 6	ASP 169
C	LEU 6	ASP 169
D	LEU 6	ASP 169
E	LEU 6	ASP 169

There are 37 helices in PDB entry 8HUZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	6	17	Right-handed alpha
Helix 2	AA2	F	32	40	Right-handed alpha
Helix 3	AA3	F	72	81	Right-handed alpha
Helix 4	AA4	F	91	100	Right-handed alpha
Helix 5	AA5	F	125	127	Right-handed 310
Helix 6	AA6	F	148	159	Right-handed alpha
Helix 7	AA7	A	7	17	Right-handed alpha
Helix 8	AA8	A	35	40	Right-handed alpha
Helix 9	AA9	A	72	81	Right-handed alpha
Helix 10	AB1	A	91	100	Right-handed alpha
Helix 11	AB2	A	125	127	Right-handed 310
Helix 12	AB3	A	148	159	Right-handed alpha
Helix 13	AB4	B	7	17	Right-handed alpha
Helix 14	AB5	B	31	42	Right-handed alpha
Helix 15	AB6	B	72	81	Right-handed alpha
Helix 16	AB7	B	91	100	Right-handed alpha
Helix 17	AB8	B	107	111	Right-handed 310
Helix 18	AB9	B	125	127	Right-handed 310
Helix 19	AC1	B	148	159	Right-handed alpha
Helix 20	AC2	C	7	17	Right-handed alpha
Helix 21	AC3	C	31	43	Right-handed alpha
Helix 22	AC4	C	72	81	Right-handed alpha
Helix 23	AC5	C	91	100	Right-handed alpha
Helix 24	AC6	C	125	127	Right-handed 310
Helix 25	AC7	C	148	159	Right-handed alpha
Helix 26	AC8	D	7	18	Right-handed alpha
Helix 27	AC9	D	31	39	Right-handed alpha
Helix 28	AD1	D	72	81	Right-handed alpha
Helix 29	AD2	D	91	100	Right-handed alpha
Helix 30	AD3	D	125	127	Right-handed 310
Helix 31	AD4	D	148	159	Right-handed alpha
Helix 32	AD5	E	7	17	Right-handed alpha
Helix 33	AD6	E	31	39	Right-handed alpha
Helix 34	AD7	E	72	81	Right-handed alpha
Helix 35	AD8	E	91	100	Right-handed alpha
Helix 36	AD9	E	125	127	Right-handed 310
Helix 37	AE1	E	148	159	Right-handed alpha

There are 12 sheets in PDB entry 8HUZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	22	25	first strand
Strand 2	F	143	147	anti-parallel
Strand 3	F	134	136	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	87	89	first strand
Strand 2	F	47	54	anti-parallel
Strand 3	F	59	66	anti-parallel
Strand 4	F	118	123	parallel
Strand 5	F	164	166	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	25	first strand
Strand 2	A	143	147	anti-parallel
Strand 3	A	134	136	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	89	first strand
Strand 2	A	47	53	anti-parallel
Strand 3	A	60	66	anti-parallel
Strand 4	A	119	123	parallel
Strand 5	A	164	166	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	25	first strand
Strand 2	B	143	147	anti-parallel
Strand 3	B	134	136	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	89	first strand
Strand 2	B	47	54	anti-parallel
Strand 3	B	60	66	anti-parallel
Strand 4	B	118	123	parallel
Strand 5	B	164	166	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	22	25	first strand
Strand 2	C	143	147	anti-parallel
Strand 3	C	134	136	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	88	89	first strand
Strand 2	C	47	53	anti-parallel
Strand 3	C	60	66	anti-parallel
Strand 4	C	118	123	parallel
Strand 5	C	164	166	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	22	25	first strand
Strand 2	D	143	147	anti-parallel
Strand 3	D	134	136	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	88	89	first strand
Strand 2	D	47	53	anti-parallel
Strand 3	D	60	66	anti-parallel
Strand 4	D	118	123	parallel
Strand 5	D	164	166	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	22	25	first strand
Strand 2	E	143	147	anti-parallel
Strand 3	E	134	136	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	88	89	first strand
Strand 2	E	47	53	anti-parallel
Strand 3	E	60	66	anti-parallel
Strand 4	E	119	123	parallel
Strand 5	E	164	166	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HUZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HUZ