Analysis of interatomic Contacts of Structural Units in PDB entry:
8HVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HVH entry

There is 1 chain in PDB entry 8HVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 32ALA 1524
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 75 helices in PDB entry 8HVH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 49Right-handed alpha
Helix 2
AA2
A
49 54Right-handed alpha
Helix 3
AA3
A
55 58Right-handed 310
Helix 4
AA4
A
67 72Right-handed alpha
Helix 5
AA5
A
74 93Right-handed alpha
Helix 6
AA6
A
102 106Right-handed 310
Helix 7
AA7
A
107 111Right-handed 310
Helix 8
AA8
A
114 128Right-handed alpha
Helix 9
AA9
A
135 153Right-handed alpha
Helix 10
AB1
A
154 159Right-handed 310
Helix 11
AB2
A
167 174Right-handed alpha
Helix 12
AB3
A
175 189Right-handed alpha
Helix 13
AB4
A
214 219Right-handed alpha
Helix 14
AB5
A
223 233Right-handed alpha
Helix 15
AB6
A
244 248Right-handed 310
Helix 16
AB7
A
252 265Right-handed alpha
Helix 17
AB8
A
299 308Right-handed alpha
Helix 18
AB9
A
313 323Right-handed alpha
Helix 19
AC1
A
326 340Right-handed alpha
Helix 20
AC2
A
345 359Right-handed alpha
Helix 21
AC3
A
366 375Right-handed alpha
Helix 22
AC4
A
389 394Right-handed alpha
Helix 23
AC5
A
397 403Right-handed alpha
Helix 24
AC6
A
410 415Right-handed alpha
Helix 25
AC7
A
422 427Right-handed alpha
Helix 26
AC8
A
431 449Right-handed alpha
Helix 27
AC9
A
452 462Right-handed alpha
Helix 28
AD1
A
463 467Right-handed 310
Helix 29
AD2
A
474 497Right-handed alpha
Helix 30
AD3
A
498 504Right-handed alpha
Helix 31
AD4
A
506 526Right-handed alpha
Helix 32
AD5
A
536 541Right-handed alpha
Helix 33
AD6
A
541 557Right-handed alpha
Helix 34
AD7
A
564 583Right-handed alpha
Helix 35
AD8
A
584 595Right-handed alpha
Helix 36
AD9
A
596 607Right-handed alpha
Helix 37
AE1
A
666 676Right-handed alpha
Helix 38
AE2
A
705 711Right-handed alpha
Helix 39
AE3
A
716 727Right-handed alpha
Helix 40
AE4
A
731 736Right-handed alpha
Helix 41
AE5
A
752 768Right-handed alpha
Helix 42
AE6
A
782 793Right-handed alpha
Helix 43
AE7
A
834 841Right-handed alpha
Helix 44
AE8
A
843 849Right-handed alpha
Helix 45
AE9
A
955 967Right-handed alpha
Helix 46
AF1
A
971 976Right-handed alpha
Helix 47
AF2
A
977 996Right-handed alpha
Helix 48
AF3
A
1007 1020Right-handed alpha
Helix 49
AF4
A
1026 1053Right-handed alpha
Helix 50
AF5
A
1056 1063Right-handed alpha
Helix 51
AF6
A
1064 1072Right-handed alpha
Helix 52
AF7
A
1073 1082Right-handed alpha
Helix 53
AF8
A
1082 1095Right-handed alpha
Helix 54
AF9
A
1098 1108Right-handed alpha
Helix 55
AG1
A
1109 1115Right-handed 310
Helix 56
AG2
A
1116 1153Right-handed alpha
Helix 57
AG3
A
1157 1164Right-handed alpha
Helix 58
AG4
A
1166 1186Right-handed alpha
Helix 59
AG5
A
1192 1200Right-handed alpha
Helix 60
AG6
A
1201 1217Right-handed alpha
Helix 61
AG7
A
1224 1232Right-handed alpha
Helix 62
AG8
A
1233 1236Right-handed 310
Helix 63
AG9
A
1237 1254Right-handed alpha
Helix 64
AH1
A
1254 1264Right-handed alpha
Helix 65
AH2
A
1328 1334Right-handed alpha
Helix 66
AH3
A
1353 1357Right-handed 310
Helix 67
AH4
A
1358 1363Right-handed alpha
Helix 68
AH5
A
1391 1402Right-handed alpha
Helix 69
AH6
A
1404 1411Right-handed alpha
Helix 70
AH7
A
1413 1417Right-handed 310
Helix 71
AH8
A
1427 1443Right-handed alpha
Helix 72
AH9
A
1457 1472Right-handed alpha
Helix 73
AI1
A
1483 1488Right-handed alpha
Helix 74
AI2
A
1506 1513Right-handed alpha
Helix 75
AI3
A
1515 1523Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 8HVH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 617first strand
Strand 2
A
685 687parallel
Strand 3
A
625 635anti-parallel
Strand 4
A
644 652anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 617first strand
Strand 2
A
685 687parallel
Strand 3
A
625 635anti-parallel
Strand 4
A
679 682anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 694first strand
Strand 2
A
771 775parallel
Strand 3
A
804 808parallel
Strand 4
A
656 660parallel
Strand 5
A
820 825parallel
Strand 6
A
828 833anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
703 704first strand
Strand 2
A
743 744anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1306 1313first strand
Strand 2
A
1289 1296anti-parallel
Strand 3
A
1344 1348anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1366 1369first strand
Strand 2
A
1446 1450parallel
Strand 3
A
1476 1480parallel
Strand 4
A
1318 1322parallel
Strand 5
A
1492 1497parallel
Strand 6
A
1500 1505anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il