Analysis of interatomic Contacts of Structural Units in PDB entry:
8HW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HW2 entry

There is 1 chain in PDB entry 8HW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 32ALA 1527
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 77 helices in PDB entry 8HW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 38Right-handed 310
Helix 2
AA2
A
39 59Right-handed alpha
Helix 3
AA3
A
67 94Right-handed alpha
Helix 4
AA4
A
102 106Right-handed 310
Helix 5
AA5
A
107 127Right-handed alpha
Helix 6
AA6
A
136 156Right-handed alpha
Helix 7
AA7
A
167 189Right-handed alpha
Helix 8
AA8
A
220 222Right-handed 310
Helix 9
AA9
A
223 228Right-handed alpha
Helix 10
AB1
A
236 240Right-handed 310
Helix 11
AB2
A
252 263Right-handed alpha
Helix 12
AB3
A
298 305Right-handed alpha
Helix 13
AB4
A
306 311Right-handed 310
Helix 14
AB5
A
317 326Right-handed alpha
Helix 15
AB6
A
327 340Right-handed alpha
Helix 16
AB7
A
345 362Right-handed alpha
Helix 17
AB8
A
370 386Right-handed alpha
Helix 18
AB9
A
387 394Right-handed alpha
Helix 19
AC1
A
397 404Right-handed alpha
Helix 20
AC2
A
405 412Right-handed alpha
Helix 21
AC3
A
423 428Right-handed alpha
Helix 22
AC4
A
428 436Right-handed alpha
Helix 23
AC5
A
440 448Right-handed alpha
Helix 24
AC6
A
452 472Right-handed alpha
Helix 25
AC7
A
472 477Right-handed alpha
Helix 26
AC8
A
481 496Right-handed alpha
Helix 27
AC9
A
497 504Right-handed alpha
Helix 28
AD1
A
506 526Right-handed alpha
Helix 29
AD2
A
527 528Right-handed 310
Helix 30
AD3
A
529 533Right-handed 310
Helix 31
AD4
A
534 556Right-handed alpha
Helix 32
AD5
A
564 579Right-handed alpha
Helix 33
AD6
A
579 584Right-handed alpha
Helix 34
AD7
A
584 606Right-handed alpha
Helix 35
AD8
A
666 675Right-handed alpha
Helix 36
AD9
A
704 711Right-handed alpha
Helix 37
AE1
A
716 727Right-handed alpha
Helix 38
AE2
A
729 734Right-handed alpha
Helix 39
AE3
A
738 742Right-handed 310
Helix 40
AE4
A
752 767Right-handed alpha
Helix 41
AE5
A
782 793Right-handed alpha
Helix 42
AE6
A
834 842Right-handed alpha
Helix 43
AE7
A
843 852Right-handed alpha
Helix 44
AE8
A
955 967Right-handed alpha
Helix 45
AE9
A
967 972Right-handed alpha
Helix 46
AF1
A
974 997Right-handed alpha
Helix 47
AF2
A
998 1001Right-handed 310
Helix 48
AF3
A
1004 1006Right-handed 310
Helix 49
AF4
A
1007 1020Right-handed alpha
Helix 50
AF5
A
1026 1053Right-handed alpha
Helix 51
AF6
A
1056 1063Right-handed alpha
Helix 52
AF7
A
1065 1071Right-handed alpha
Helix 53
AF8
A
1076 1082Right-handed alpha
Helix 54
AF9
A
1083 1108Right-handed alpha
Helix 55
AG1
A
1116 1151Right-handed alpha
Helix 56
AG2
A
1157 1162Right-handed alpha
Helix 57
AG3
A
1167 1169Right-handed 310
Helix 58
AG4
A
1170 1183Right-handed alpha
Helix 59
AG5
A
1185 1190Right-handed alpha
Helix 60
AG6
A
1201 1217Right-handed alpha
Helix 61
AG7
A
1218 1221Right-handed 310
Helix 62
AG8
A
1222 1232Right-handed alpha
Helix 63
AG9
A
1235 1240Right-handed alpha
Helix 64
AH1
A
1249 1253Right-handed 310
Helix 65
AH2
A
1254 1263Right-handed alpha
Helix 66
AH3
A
1274 1278Right-handed 310
Helix 67
AH4
A
1328 1337Right-handed alpha
Helix 68
AH5
A
1358 1365Right-handed alpha
Helix 69
AH6
A
1379 1385Right-handed alpha
Helix 70
AH7
A
1391 1402Right-handed alpha
Helix 71
AH8
A
1404 1411Right-handed alpha
Helix 72
AH9
A
1413 1417Right-handed 310
Helix 73
AI1
A
1420 1424Right-handed 310
Helix 74
AI2
A
1427 1443Right-handed alpha
Helix 75
AI3
A
1457 1472Right-handed alpha
Helix 76
AI4
A
1506 1514Right-handed alpha
Helix 77
AI5
A
1515 1524Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 8HW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
642 647first strand
Strand 2
A
625 635anti-parallel
Strand 3
A
650 652anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
642 647first strand
Strand 2
A
625 635anti-parallel
Strand 3
A
679 687anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
692 694first strand
Strand 2
A
771 775parallel
Strand 3
A
804 808parallel
Strand 4
A
656 660parallel
Strand 5
A
821 825parallel
Strand 6
A
828 833anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1304 1309first strand
Strand 2
A
1289 1297anti-parallel
Strand 3
A
1342 1349anti-parallel
Strand 4
A
1352 1353anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1368 1369first strand
Strand 2
A
1446 1449parallel
Strand 3
A
1476 1480parallel
Strand 4
A
1319 1322parallel
Strand 5
A
1492 1497parallel
Strand 6
A
1500 1505anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il