Analysis of interatomic Contacts of Structural Units in PDB entry:
8HW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HW4 entry

There is 1 chain in PDB entry 8HW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 32MET 1520
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 8HW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 49Right-handed alpha
Helix 2
AA2
A
52 57Right-handed alpha
Helix 3
AA3
A
69 74Right-handed alpha
Helix 4
AA4
A
75 93Right-handed alpha
Helix 5
AA5
A
94 96Right-handed 310
Helix 6
AA6
A
102 128Right-handed alpha
Helix 7
AA7
A
135 147Right-handed alpha
Helix 8
AA8
A
148 163Right-handed alpha
Helix 9
AA9
A
167 190Right-handed alpha
Helix 10
AB1
A
213 219Right-handed alpha
Helix 11
AB2
A
220 222Right-handed 310
Helix 12
AB3
A
223 233Right-handed alpha
Helix 13
AB4
A
236 240Right-handed 310
Helix 14
AB5
A
253 263Right-handed alpha
Helix 15
AB6
A
298 307Right-handed alpha
Helix 16
AB7
A
314 325Right-handed alpha
Helix 17
AB8
A
326 340Right-handed alpha
Helix 18
AB9
A
346 358Right-handed alpha
Helix 19
AC1
A
370 375Right-handed alpha
Helix 20
AC2
A
377 395Right-handed alpha
Helix 21
AC3
A
397 404Right-handed alpha
Helix 22
AC4
A
405 410Right-handed alpha
Helix 23
AC5
A
411 413Right-handed 310
Helix 24
AC6
A
423 428Right-handed alpha
Helix 25
AC7
A
428 437Right-handed alpha
Helix 26
AC8
A
439 449Right-handed alpha
Helix 27
AC9
A
450 462Right-handed alpha
Helix 28
AD1
A
463 466Right-handed 310
Helix 29
AD2
A
467 473Right-handed alpha
Helix 30
AD3
A
481 496Right-handed alpha
Helix 31
AD4
A
497 504Right-handed alpha
Helix 32
AD5
A
506 527Right-handed alpha
Helix 33
AD6
A
528 533Right-handed 310
Helix 34
AD7
A
541 558Right-handed alpha
Helix 35
AD8
A
564 580Right-handed alpha
Helix 36
AD9
A
581 583Right-handed 310
Helix 37
AE1
A
584 596Right-handed alpha
Helix 38
AE2
A
597 607Right-handed alpha
Helix 39
AE3
A
667 676Right-handed alpha
Helix 40
AE4
A
704 711Right-handed alpha
Helix 41
AE5
A
716 727Right-handed alpha
Helix 42
AE6
A
729 736Right-handed alpha
Helix 43
AE7
A
744 748Right-handed 310
Helix 44
AE8
A
752 767Right-handed alpha
Helix 45
AE9
A
776 781Right-handed 310
Helix 46
AF1
A
782 793Right-handed alpha
Helix 47
AF2
A
834 839Right-handed alpha
Helix 48
AF3
A
843 850Right-handed alpha
Helix 49
AF4
A
955 965Right-handed alpha
Helix 50
AF5
A
970 997Right-handed alpha
Helix 51
AF6
A
1007 1025Right-handed alpha
Helix 52
AF7
A
1026 1053Right-handed alpha
Helix 53
AF8
A
1056 1063Right-handed alpha
Helix 54
AF9
A
1066 1071Right-handed alpha
Helix 55
AG1
A
1074 1082Right-handed alpha
Helix 56
AG2
A
1082 1108Right-handed alpha
Helix 57
AG3
A
1109 1113Right-handed 310
Helix 58
AG4
A
1114 1142Right-handed alpha
Helix 59
AG5
A
1144 1151Right-handed alpha
Helix 60
AG6
A
1153 1162Right-handed alpha
Helix 61
AG7
A
1168 1202Right-handed alpha
Helix 62
AG8
A
1206 1216Right-handed alpha
Helix 63
AG9
A
1222 1234Right-handed alpha
Helix 64
AH1
A
1241 1248Right-handed alpha
Helix 65
AH2
A
1254 1263Right-handed alpha
Helix 66
AH3
A
1283 1287Right-handed 310
Helix 67
AH4
A
1329 1337Right-handed alpha
Helix 68
AH5
A
1355 1357Right-handed 310
Helix 69
AH6
A
1358 1366Right-handed alpha
Helix 70
AH7
A
1391 1402Right-handed alpha
Helix 71
AH8
A
1404 1410Right-handed alpha
Helix 72
AH9
A
1413 1417Right-handed 310
Helix 73
AI1
A
1427 1443Right-handed alpha
Helix 74
AI2
A
1457 1472Right-handed alpha
Helix 75
AI3
A
1506 1514Right-handed alpha
Helix 76
AI4
A
1515 1520Right-handed alpha
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There are 6 sheets in PDB entry 8HW4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 617first strand
Strand 2
A
685 686parallel
Strand 3
A
625 634anti-parallel
Strand 4
A
644 652anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 693first strand
Strand 2
A
771 773parallel
Strand 3
A
804 808parallel
Strand 4
A
657 660parallel
Strand 5
A
820 825parallel
Strand 6
A
828 833anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1306 1309first strand
Strand 2
A
1289 1296anti-parallel
Strand 3
A
1312 1313anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1306 1309first strand
Strand 2
A
1289 1296anti-parallel
Strand 3
A
1344 1349anti-parallel
Strand 4
A
1352 1353anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1319 1323first strand
Strand 2
A
1492 1497parallel
Strand 3
A
1500 1505anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1368 1369first strand
Strand 2
A
1446 1449parallel
Strand 3
A
1476 1478parallel
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