Analysis of interatomic Contacts of Structural Units in PDB entry:
8HW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HW8 entry

There is 1 chain in PDB entry 8HW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 24SER 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8HW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 43Right-handed alpha
Helix 2
AA2
A
64 78Right-handed alpha
Helix 3
AA3
A
93 103Right-handed alpha
Helix 4
AA4
A
103 121Right-handed alpha
Helix 5
AA5
A
134 136Right-handed 310
Helix 6
AA6
A
137 153Right-handed alpha
Helix 7
AA7
A
154 156Right-handed 310
Helix 8
AA8
A
166 174Right-handed alpha
Helix 9
AA9
A
175 181Right-handed alpha
Helix 10
AB1
A
221 233Right-handed alpha
Helix 11
AB2
A
235 237Right-handed 310
Helix 12
AB3
A
275 279Right-handed alpha
Helix 13
AB4
A
283 287Right-handed 310
Helix 14
AB5
A
311 326Right-handed alpha
Helix 15
AB6
A
334 338Right-handed 310
Helix 16
AB7
A
342 349Right-handed alpha
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There are 2 sheets in PDB entry 8HW8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 30first strand
Strand 2
A
46 52parallel
Strand 3
A
82 88parallel
Strand 4
A
125 129parallel
Strand 5
A
158 163parallel
Strand 6
A
185 188parallel
Strand 7
A
239 244parallel
Strand 8
A
329 333parallel
Strand 9
A
25 30parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 274first strand
Strand 2
A
246 251anti-parallel
Strand 3
A
306 309anti-parallel
Strand 4
A
295 299anti-parallel
Strand 5
A
288 290anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il