Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HWA entry

There are 8 chains in PDB entry 8HWA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 700
B	GLY 323	LYS 701
C	GLY 323	LYS 701
D	GLY 323	LYS 701
E	GLY 323	LYS 701
F	MET 1	LEU 700
S	T 1	T 6
K	MET 1	VAL 231

There are150 helices in PDB entry 8HWA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	25	Right-handed alpha
Helix 2	AA2	A	36	47	Right-handed alpha
Helix 3	AA3	A	82	105	Right-handed alpha
Helix 4	AA4	A	108	119	Right-handed alpha
Helix 5	AA5	A	144	160	Right-handed alpha
Helix 6	AA6	A	163	168	Right-handed alpha
Helix 7	AA7	A	169	174	Right-handed 310
Helix 8	AA8	A	203	207	Right-handed 310
Helix 9	AA9	A	226	230	Right-handed 310
Helix 10	AB1	A	242	254	Right-handed alpha
Helix 11	AB2	A	310	314	Right-handed 310
Helix 12	AB3	A	325	336	Right-handed alpha
Helix 13	AB4	A	363	372	Right-handed alpha
Helix 14	AB5	A	373	375	Right-handed 310
Helix 15	AB6	A	376	384	Right-handed 310
Helix 16	AB7	A	385	398	Right-handed alpha
Helix 17	AB8	A	429	435	Right-handed 310
Helix 18	AB9	A	447	451	Right-handed 310
Helix 19	AC1	A	455	469	Right-handed alpha
Helix 20	AC2	A	476	488	Right-handed alpha
Helix 21	AC3	A	508	521	Right-handed alpha
Helix 22	AC4	A	528	532	Right-handed 310
Helix 23	AC5	A	541	546	Right-handed alpha
Helix 24	AC6	A	570	577	Right-handed alpha
Helix 25	AC7	A	614	619	Right-handed alpha
Helix 26	AC8	A	632	634	Right-handed 310
Helix 27	AC9	A	635	641	Right-handed alpha
Helix 28	AD1	A	653	660	Right-handed alpha
Helix 29	AD2	A	664	680	Right-handed alpha
Helix 30	AD3	A	693	700	Right-handed alpha
Helix 31	AD4	B	325	336	Right-handed alpha
Helix 32	AD5	B	363	372	Right-handed alpha
Helix 33	AD6	B	373	375	Right-handed 310
Helix 34	AD7	B	376	381	Right-handed alpha
Helix 35	AD8	B	382	384	Right-handed 310
Helix 36	AD9	B	385	398	Right-handed alpha
Helix 37	AE1	B	429	435	Right-handed 310
Helix 38	AE2	B	447	451	Right-handed 310
Helix 39	AE3	B	455	469	Right-handed alpha
Helix 40	AE4	B	476	488	Right-handed alpha
Helix 41	AE5	B	508	521	Right-handed alpha
Helix 42	AE6	B	528	532	Right-handed 310
Helix 43	AE7	B	541	546	Right-handed alpha
Helix 44	AE8	B	570	577	Right-handed alpha
Helix 45	AE9	B	614	619	Right-handed alpha
Helix 46	AF1	B	632	634	Right-handed 310
Helix 47	AF2	B	635	641	Right-handed alpha
Helix 48	AF3	B	653	660	Right-handed alpha
Helix 49	AF4	B	664	680	Right-handed alpha
Helix 50	AF5	B	693	701	Right-handed alpha
Helix 51	AF6	C	324	336	Right-handed alpha
Helix 52	AF7	C	363	372	Right-handed alpha
Helix 53	AF8	C	373	375	Right-handed 310
Helix 54	AF9	C	376	381	Right-handed alpha
Helix 55	AG1	C	382	384	Right-handed 310
Helix 56	AG2	C	385	398	Right-handed alpha
Helix 57	AG3	C	429	435	Right-handed 310
Helix 58	AG4	C	447	451	Right-handed 310
Helix 59	AG5	C	455	469	Right-handed alpha
Helix 60	AG6	C	475	488	Right-handed alpha
Helix 61	AG7	C	489	491	Right-handed 310
Helix 62	AG8	C	508	521	Right-handed alpha
Helix 63	AG9	C	528	532	Right-handed 310
Helix 64	AH1	C	541	546	Right-handed alpha
Helix 65	AH2	C	570	577	Right-handed alpha
Helix 66	AH3	C	614	619	Right-handed alpha
Helix 67	AH4	C	635	641	Right-handed alpha
Helix 68	AH5	C	653	660	Right-handed alpha
Helix 69	AH6	C	664	680	Right-handed alpha
Helix 70	AH7	C	689	692	Right-handed 310
Helix 71	AH8	C	693	699	Right-handed alpha
Helix 72	AH9	D	324	336	Right-handed alpha
Helix 73	AI1	D	363	372	Right-handed alpha
Helix 74	AI2	D	373	375	Right-handed 310
Helix 75	AI3	D	376	381	Right-handed alpha
Helix 76	AI4	D	382	384	Right-handed 310
Helix 77	AI5	D	385	398	Right-handed alpha
Helix 78	AI6	D	431	435	Right-handed 310
Helix 79	AI7	D	455	469	Right-handed alpha
Helix 80	AI8	D	475	488	Right-handed alpha
Helix 81	AI9	D	508	521	Right-handed alpha
Helix 82	AJ1	D	529	534	Right-handed alpha
Helix 83	AJ2	D	541	546	Right-handed alpha
Helix 84	AJ3	D	570	576	Right-handed alpha
Helix 85	AJ4	D	614	619	Right-handed alpha
Helix 86	AJ5	D	635	641	Right-handed alpha
Helix 87	AJ6	D	653	660	Right-handed alpha
Helix 88	AJ7	D	664	680	Right-handed alpha
Helix 89	AJ8	D	689	692	Right-handed 310
Helix 90	AJ9	D	693	699	Right-handed alpha
Helix 91	AK1	E	325	336	Right-handed alpha
Helix 92	AK2	E	363	372	Right-handed alpha
Helix 93	AK3	E	373	375	Right-handed 310
Helix 94	AK4	E	376	381	Right-handed alpha
Helix 95	AK5	E	382	384	Right-handed 310
Helix 96	AK6	E	385	398	Right-handed alpha
Helix 97	AK7	E	431	435	Right-handed 310
Helix 98	AK8	E	447	451	Right-handed 310
Helix 99	AK9	E	455	469	Right-handed alpha
Helix 100	AL1	E	472	474	Right-handed 310
Helix 101	AL2	E	475	488	Right-handed alpha
Helix 102	AL3	E	508	521	Right-handed alpha
Helix 103	AL4	E	541	546	Right-handed alpha
Helix 104	AL5	E	570	577	Right-handed alpha
Helix 105	AL6	E	614	619	Right-handed alpha
Helix 106	AL7	E	632	634	Right-handed 310
Helix 107	AL8	E	635	642	Right-handed alpha
Helix 108	AL9	E	654	661	Right-handed alpha
Helix 109	AM1	E	664	680	Right-handed alpha
Helix 110	AM2	E	689	692	Right-handed 310
Helix 111	AM3	E	693	698	Right-handed alpha
Helix 112	AM4	F	2	6	Right-handed alpha
Helix 113	AM5	F	20	25	Right-handed alpha
Helix 114	AM6	F	36	47	Right-handed alpha
Helix 115	AM7	F	78	104	Right-handed alpha
Helix 116	AM8	F	108	119	Right-handed alpha
Helix 117	AM9	F	144	159	Right-handed alpha
Helix 118	AN1	F	163	168	Right-handed alpha
Helix 119	AN2	F	203	207	Right-handed 310
Helix 120	AN3	F	226	231	Right-handed alpha
Helix 121	AN4	F	242	254	Right-handed alpha
Helix 122	AN5	F	260	264	Right-handed 310
Helix 123	AN6	F	324	336	Right-handed alpha
Helix 124	AN7	F	363	372	Right-handed alpha
Helix 125	AN8	F	373	375	Right-handed 310
Helix 126	AN9	F	376	383	Right-handed 310
Helix 127	AO1	F	385	398	Right-handed alpha
Helix 128	AO2	F	431	435	Right-handed 310
Helix 129	AO3	F	455	469	Right-handed alpha
Helix 130	AO4	F	472	474	Right-handed 310
Helix 131	AO5	F	475	488	Right-handed alpha
Helix 132	AO6	F	508	521	Right-handed alpha
Helix 133	AO7	F	528	532	Right-handed 310
Helix 134	AO8	F	541	546	Right-handed alpha
Helix 135	AO9	F	570	577	Right-handed alpha
Helix 136	AP1	F	614	619	Right-handed alpha
Helix 137	AP2	F	632	634	Right-handed 310
Helix 138	AP3	F	635	641	Right-handed alpha
Helix 139	AP4	F	654	659	Right-handed alpha
Helix 140	AP5	F	664	680	Right-handed alpha
Helix 141	AP6	F	689	692	Right-handed 310
Helix 142	AP7	F	693	699	Right-handed alpha
Helix 143	AP8	K	3	5	Right-handed 310
Helix 144	AP9	K	20	27	Right-handed alpha
Helix 145	AQ1	K	36	47	Right-handed alpha
Helix 146	AQ2	K	78	104	Right-handed alpha
Helix 147	AQ3	K	108	119	Right-handed alpha
Helix 148	AQ4	K	144	159	Right-handed alpha
Helix 149	AQ5	K	163	168	Right-handed alpha
Helix 150	AQ6	K	203	207	Right-handed 310

There are 42 sheets in PDB entry 8HWA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	12	14	anti-parallel
Strand 3	A	53	55	anti-parallel
Strand 4	A	179	181	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	73	first strand
Strand 2	A	131	143	anti-parallel
Strand 3	A	120	125	anti-parallel
Strand 4	A	195	197	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	73	first strand
Strand 2	A	131	143	anti-parallel
Strand 3	A	219	220	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	295	first strand
Strand 2	A	302	307	anti-parallel
Strand 3	A	298	299	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	295	first strand
Strand 2	A	302	307	anti-parallel
Strand 3	A	317	320	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	347	350	anti-parallel
Strand 3	A	355	356	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	415	first strand
Strand 2	A	418	421	anti-parallel
Strand 3	A	427	428	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	524	526	first strand
Strand 2	A	552	558	parallel
Strand 3	A	599	604	parallel
Strand 4	A	498	503	parallel
Strand 5	A	621	626	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	581	582	first strand
Strand 2	A	594	595	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	629	630	first strand
Strand 2	A	648	649	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	347	350	anti-parallel
Strand 3	B	355	356	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	415	first strand
Strand 2	B	418	421	anti-parallel
Strand 3	B	427	428	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	526	first strand
Strand 2	B	553	555	parallel
Strand 3	B	600	604	parallel
Strand 4	B	498	503	parallel
Strand 5	B	621	626	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	581	583	first strand
Strand 2	B	593	595	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	629	631	first strand
Strand 2	B	648	650	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	340	341	first strand
Strand 2	C	347	350	anti-parallel
Strand 3	C	355	356	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	415	first strand
Strand 2	C	418	421	anti-parallel
Strand 3	C	427	428	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	525	526	first strand
Strand 2	C	552	556	parallel
Strand 3	C	599	603	parallel
Strand 4	C	498	503	parallel
Strand 5	C	621	626	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	581	583	first strand
Strand 2	C	593	595	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	629	631	first strand
Strand 2	C	648	650	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	340	341	first strand
Strand 2	D	347	351	anti-parallel
Strand 3	D	354	356	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	415	first strand
Strand 2	D	418	421	anti-parallel
Strand 3	D	427	428	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	525	526	first strand
Strand 2	D	553	556	parallel
Strand 3	D	600	603	parallel
Strand 4	D	498	503	parallel
Strand 5	D	621	626	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	581	583	first strand
Strand 2	D	593	595	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	629	631	first strand
Strand 2	D	648	650	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	340	341	first strand
Strand 2	E	347	348	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	415	first strand
Strand 2	E	418	421	anti-parallel
Strand 3	E	427	428	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	525	527	first strand
Strand 2	E	552	555	parallel
Strand 3	E	599	602	parallel
Strand 4	E	498	502	parallel
Strand 5	E	621	625	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	629	631	first strand
Strand 2	E	648	650	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7	8	first strand
Strand 2	F	212	213	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	35	first strand
Strand 2	F	11	14	anti-parallel
Strand 3	F	54	55	anti-parallel
Strand 4	F	179	180	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	73	first strand
Strand 2	F	131	143	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	125	first strand
Strand 2	F	195	197	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	294	299	first strand
Strand 2	F	302	307	anti-parallel
Strand 3	F	317	320	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	340	341	first strand
Strand 2	F	347	348	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	415	first strand
Strand 2	F	418	421	anti-parallel
Strand 3	F	427	428	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	525	527	first strand
Strand 2	F	553	555	parallel
Strand 3	F	600	603	parallel
Strand 4	F	498	503	parallel
Strand 5	F	621	626	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	628	631	first strand
Strand 2	F	647	650	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	7	8	first strand
Strand 2	K	212	213	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	33	35	first strand
Strand 2	K	11	14	anti-parallel
Strand 3	K	53	55	anti-parallel
Strand 4	K	179	181	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	64	73	first strand
Strand 2	K	131	143	anti-parallel
Strand 3	K	120	121	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	124	125	first strand
Strand 2	K	195	196	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HWA

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWA