Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HWC entry

There are 6 chains in PDB entry 8HWC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	GLY 323	PRO 688
F	GLY 323	PRO 694
D	GLY 323	PRO 688
C	ASP 322	PRO 688
B	ASP 322	TYR 699
A	GLY 323	LEU 700

There are 79 helices in PDB entry 8HWC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	324	336	Right-handed alpha
Helix 2	AA2	E	363	371	Right-handed alpha
Helix 3	AA3	E	372	374	Right-handed 310
Helix 4	AA4	E	376	381	Right-handed alpha
Helix 5	AA5	E	387	400	Right-handed alpha
Helix 6	AA6	E	430	435	Right-handed 310
Helix 7	AA7	E	455	469	Right-handed alpha
Helix 8	AA8	E	476	488	Right-handed alpha
Helix 9	AA9	E	508	521	Right-handed alpha
Helix 10	AB1	E	571	577	Right-handed alpha
Helix 11	AB2	E	617	621	Right-handed 310
Helix 12	AB3	E	664	680	Right-handed alpha
Helix 13	AB4	F	324	336	Right-handed alpha
Helix 14	AB5	F	363	371	Right-handed alpha
Helix 15	AB6	F	372	374	Right-handed 310
Helix 16	AB7	F	376	381	Right-handed alpha
Helix 17	AB8	F	385	398	Right-handed alpha
Helix 18	AB9	F	429	435	Right-handed 310
Helix 19	AC1	F	456	469	Right-handed alpha
Helix 20	AC2	F	476	488	Right-handed alpha
Helix 21	AC3	F	508	521	Right-handed alpha
Helix 22	AC4	F	572	577	Right-handed alpha
Helix 23	AC5	F	617	621	Right-handed 310
Helix 24	AC6	F	656	661	Right-handed alpha
Helix 25	AC7	F	664	680	Right-handed alpha
Helix 26	AC8	D	324	336	Right-handed alpha
Helix 27	AC9	D	363	371	Right-handed alpha
Helix 28	AD1	D	376	381	Right-handed alpha
Helix 29	AD2	D	387	400	Right-handed alpha
Helix 30	AD3	D	431	434	Right-handed 310
Helix 31	AD4	D	455	469	Right-handed alpha
Helix 32	AD5	D	476	488	Right-handed alpha
Helix 33	AD6	D	510	521	Right-handed alpha
Helix 34	AD7	D	574	578	Right-handed 310
Helix 35	AD8	D	617	621	Right-handed 310
Helix 36	AD9	D	657	661	Right-handed alpha
Helix 37	AE1	D	664	680	Right-handed alpha
Helix 38	AE2	C	324	336	Right-handed alpha
Helix 39	AE3	C	363	371	Right-handed alpha
Helix 40	AE4	C	376	381	Right-handed alpha
Helix 41	AE5	C	390	398	Right-handed alpha
Helix 42	AE6	C	455	469	Right-handed alpha
Helix 43	AE7	C	476	488	Right-handed alpha
Helix 44	AE8	C	489	491	Right-handed 310
Helix 45	AE9	C	508	521	Right-handed alpha
Helix 46	AF1	C	617	621	Right-handed 310
Helix 47	AF2	C	656	661	Right-handed alpha
Helix 48	AF3	C	664	680	Right-handed alpha
Helix 49	AF4	B	324	336	Right-handed alpha
Helix 50	AF5	B	363	371	Right-handed alpha
Helix 51	AF6	B	372	374	Right-handed 310
Helix 52	AF7	B	376	381	Right-handed alpha
Helix 53	AF8	B	387	398	Right-handed alpha
Helix 54	AF9	B	430	435	Right-handed 310
Helix 55	AG1	B	455	469	Right-handed alpha
Helix 56	AG2	B	476	488	Right-handed alpha
Helix 57	AG3	B	508	521	Right-handed alpha
Helix 58	AG4	B	529	534	Right-handed alpha
Helix 59	AG5	B	544	548	Right-handed 310
Helix 60	AG6	B	571	577	Right-handed alpha
Helix 61	AG7	B	617	621	Right-handed 310
Helix 62	AG8	B	656	661	Right-handed alpha
Helix 63	AG9	B	664	680	Right-handed alpha
Helix 64	AH1	A	324	336	Right-handed alpha
Helix 65	AH2	A	363	371	Right-handed alpha
Helix 66	AH3	A	372	374	Right-handed 310
Helix 67	AH4	A	376	381	Right-handed alpha
Helix 68	AH5	A	386	398	Right-handed alpha
Helix 69	AH6	A	429	435	Right-handed 310
Helix 70	AH7	A	455	469	Right-handed alpha
Helix 71	AH8	A	476	488	Right-handed alpha
Helix 72	AH9	A	508	521	Right-handed alpha
Helix 73	AI1	A	530	534	Right-handed 310
Helix 74	AI2	A	541	546	Right-handed alpha
Helix 75	AI3	A	570	577	Right-handed alpha
Helix 76	AI4	A	617	621	Right-handed 310
Helix 77	AI5	A	635	639	Right-handed 310
Helix 78	AI6	A	654	661	Right-handed alpha
Helix 79	AI7	A	664	680	Right-handed alpha

There are 23 sheets in PDB entry 8HWC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	341	first strand
Strand 2	E	347	351	anti-parallel
Strand 3	E	354	356	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	415	first strand
Strand 2	E	418	421	anti-parallel
Strand 3	E	427	428	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	500	503	first strand
Strand 2	E	623	626	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	553	555	first strand
Strand 2	E	600	602	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	341	first strand
Strand 2	F	347	351	anti-parallel
Strand 3	F	354	356	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	415	first strand
Strand 2	F	418	421	anti-parallel
Strand 3	F	427	428	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	500	503	first strand
Strand 2	F	623	626	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	525	526	first strand
Strand 2	F	553	555	parallel
Strand 3	F	600	602	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	341	first strand
Strand 2	D	347	351	anti-parallel
Strand 3	D	354	356	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	415	first strand
Strand 2	D	418	421	anti-parallel
Strand 3	D	427	429	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	341	first strand
Strand 2	C	347	351	anti-parallel
Strand 3	C	354	356	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	415	first strand
Strand 2	C	418	421	anti-parallel
Strand 3	C	427	428	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	500	503	first strand
Strand 2	C	623	626	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	552	553	first strand
Strand 2	C	599	600	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	347	351	anti-parallel
Strand 3	B	354	356	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	415	first strand
Strand 2	B	418	421	anti-parallel
Strand 3	B	427	428	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	502	first strand
Strand 2	B	623	625	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	526	first strand
Strand 2	B	553	555	parallel
Strand 3	B	600	602	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	340	341	first strand
Strand 2	A	347	351	anti-parallel
Strand 3	A	354	356	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	415	first strand
Strand 2	A	418	421	anti-parallel
Strand 3	A	427	428	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	502	first strand
Strand 2	A	623	625	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	525	526	first strand
Strand 2	A	553	555	parallel
Strand 3	A	600	602	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	628	630	first strand
Strand 2	A	647	649	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HWC

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWC