Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HWE entry

There are 6 chains in PDB entry 8HWE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	GLY 323	LYS 701
C	GLY 323	LYS 701
F	GLY 323	PRO 688
A	GLY 323	PRO 690
E	GLY 323	LEU 700
B	GLY 323	LYS 701

There are107 helices in PDB entry 8HWE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	324	336	Right-handed alpha
Helix 2	AA2	D	363	371	Right-handed alpha
Helix 3	AA3	D	372	375	Right-handed 310
Helix 4	AA4	D	376	384	Right-handed 310
Helix 5	AA5	D	385	397	Right-handed alpha
Helix 6	AA6	D	430	435	Right-handed alpha
Helix 7	AA7	D	447	451	Right-handed 310
Helix 8	AA8	D	455	469	Right-handed alpha
Helix 9	AA9	D	475	488	Right-handed alpha
Helix 10	AB1	D	508	521	Right-handed alpha
Helix 11	AB2	D	528	532	Right-handed 310
Helix 12	AB3	D	541	546	Right-handed alpha
Helix 13	AB4	D	570	578	Right-handed alpha
Helix 14	AB5	D	614	619	Right-handed alpha
Helix 15	AB6	D	632	635	Right-handed 310
Helix 16	AB7	D	636	641	Right-handed alpha
Helix 17	AB8	D	656	661	Right-handed alpha
Helix 18	AB9	D	664	680	Right-handed alpha
Helix 19	AC1	D	689	692	Right-handed 310
Helix 20	AC2	D	693	700	Right-handed alpha
Helix 21	AC3	C	324	336	Right-handed alpha
Helix 22	AC4	C	363	371	Right-handed alpha
Helix 23	AC5	C	372	375	Right-handed 310
Helix 24	AC6	C	376	384	Right-handed 310
Helix 25	AC7	C	390	397	Right-handed alpha
Helix 26	AC8	C	430	435	Right-handed alpha
Helix 27	AC9	C	447	451	Right-handed 310
Helix 28	AD1	C	455	469	Right-handed alpha
Helix 29	AD2	C	475	488	Right-handed alpha
Helix 30	AD3	C	508	521	Right-handed alpha
Helix 31	AD4	C	541	547	Right-handed alpha
Helix 32	AD5	C	570	578	Right-handed alpha
Helix 33	AD6	C	614	619	Right-handed alpha
Helix 34	AD7	C	632	634	Right-handed 310
Helix 35	AD8	C	635	641	Right-handed alpha
Helix 36	AD9	C	656	661	Right-handed alpha
Helix 37	AE1	C	664	680	Right-handed alpha
Helix 38	AE2	C	689	692	Right-handed 310
Helix 39	AE3	C	693	701	Right-handed alpha
Helix 40	AE4	F	324	336	Right-handed alpha
Helix 41	AE5	F	363	371	Right-handed alpha
Helix 42	AE6	F	372	375	Right-handed 310
Helix 43	AE7	F	376	381	Right-handed alpha
Helix 44	AE8	F	385	388	Right-handed 310
Helix 45	AE9	F	389	398	Right-handed alpha
Helix 46	AF1	F	430	435	Right-handed alpha
Helix 47	AF2	F	447	451	Right-handed 310
Helix 48	AF3	F	455	469	Right-handed alpha
Helix 49	AF4	F	475	489	Right-handed alpha
Helix 50	AF5	F	508	521	Right-handed alpha
Helix 51	AF6	F	522	524	Right-handed 310
Helix 52	AF7	F	573	577	Right-handed alpha
Helix 53	AF8	F	615	619	Right-handed alpha
Helix 54	AF9	F	665	680	Right-handed alpha
Helix 55	AG1	A	324	336	Right-handed alpha
Helix 56	AG2	A	363	371	Right-handed alpha
Helix 57	AG3	A	372	375	Right-handed 310
Helix 58	AG4	A	376	384	Right-handed 310
Helix 59	AG5	A	390	400	Right-handed alpha
Helix 60	AG6	A	430	435	Right-handed alpha
Helix 61	AG7	A	447	451	Right-handed 310
Helix 62	AG8	A	455	469	Right-handed alpha
Helix 63	AG9	A	475	488	Right-handed alpha
Helix 64	AH1	A	508	521	Right-handed alpha
Helix 65	AH2	A	543	547	Right-handed 310
Helix 66	AH3	A	571	578	Right-handed alpha
Helix 67	AH4	A	632	635	Right-handed 310
Helix 68	AH5	A	636	641	Right-handed alpha
Helix 69	AH6	A	656	661	Right-handed alpha
Helix 70	AH7	A	664	677	Right-handed alpha
Helix 71	AH8	E	324	336	Right-handed alpha
Helix 72	AH9	E	363	371	Right-handed alpha
Helix 73	AI1	E	372	375	Right-handed 310
Helix 74	AI2	E	376	381	Right-handed alpha
Helix 75	AI3	E	382	384	Right-handed 310
Helix 76	AI4	E	385	387	Right-handed 310
Helix 77	AI5	E	388	398	Right-handed alpha
Helix 78	AI6	E	430	435	Right-handed alpha
Helix 79	AI7	E	447	451	Right-handed 310
Helix 80	AI8	E	455	469	Right-handed alpha
Helix 81	AI9	E	476	489	Right-handed alpha
Helix 82	AJ1	E	508	521	Right-handed alpha
Helix 83	AJ2	E	541	547	Right-handed alpha
Helix 84	AJ3	E	570	578	Right-handed alpha
Helix 85	AJ4	E	614	619	Right-handed alpha
Helix 86	AJ5	E	632	636	Right-handed 310
Helix 87	AJ6	E	656	661	Right-handed alpha
Helix 88	AJ7	E	664	680	Right-handed alpha
Helix 89	AJ8	E	689	692	Right-handed 310
Helix 90	AJ9	E	693	700	Right-handed alpha
Helix 91	AK1	B	324	336	Right-handed alpha
Helix 92	AK2	B	363	371	Right-handed alpha
Helix 93	AK3	B	372	375	Right-handed 310
Helix 94	AK4	B	376	380	Right-handed 310
Helix 95	AK5	B	385	390	Right-handed alpha
Helix 96	AK6	B	390	398	Right-handed alpha
Helix 97	AK7	B	430	435	Right-handed alpha
Helix 98	AK8	B	447	451	Right-handed 310
Helix 99	AK9	B	455	469	Right-handed alpha
Helix 100	AL1	B	475	488	Right-handed alpha
Helix 101	AL2	B	508	521	Right-handed alpha
Helix 102	AL3	B	541	547	Right-handed alpha
Helix 103	AL4	B	570	578	Right-handed alpha
Helix 104	AL5	B	632	636	Right-handed 310
Helix 105	AL6	B	656	661	Right-handed alpha
Helix 106	AL7	B	664	680	Right-handed alpha
Helix 107	AL8	B	693	700	Right-handed alpha

There are 27 sheets in PDB entry 8HWE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	341	first strand
Strand 2	D	347	350	anti-parallel
Strand 3	D	355	356	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	415	first strand
Strand 2	D	418	421	anti-parallel
Strand 3	D	427	428	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	525	527	first strand
Strand 2	D	552	555	parallel
Strand 3	D	599	602	parallel
Strand 4	D	498	500	parallel
Strand 5	D	621	623	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	581	583	first strand
Strand 2	D	593	595	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	629	631	first strand
Strand 2	D	648	650	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	341	first strand
Strand 2	C	347	350	anti-parallel
Strand 3	C	355	356	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	415	first strand
Strand 2	C	418	421	anti-parallel
Strand 3	C	427	428	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	525	527	first strand
Strand 2	C	552	555	parallel
Strand 3	C	599	602	parallel
Strand 4	C	498	500	parallel
Strand 5	C	621	623	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	581	582	first strand
Strand 2	C	594	595	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	628	631	first strand
Strand 2	C	647	650	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	341	first strand
Strand 2	F	347	351	anti-parallel
Strand 3	F	354	356	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	415	first strand
Strand 2	F	418	421	anti-parallel
Strand 3	F	427	428	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	552	555	first strand
Strand 2	F	599	602	parallel
Strand 3	F	498	500	parallel
Strand 4	F	621	623	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	347	350	anti-parallel
Strand 3	A	355	356	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	415	first strand
Strand 2	A	418	421	anti-parallel
Strand 3	A	427	428	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	525	526	first strand
Strand 2	A	552	558	parallel
Strand 3	A	599	604	parallel
Strand 4	A	498	500	parallel
Strand 5	A	621	623	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	629	631	first strand
Strand 2	A	648	650	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	341	first strand
Strand 2	E	347	350	anti-parallel
Strand 3	E	355	356	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	415	first strand
Strand 2	E	418	421	anti-parallel
Strand 3	E	427	428	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	525	526	first strand
Strand 2	E	552	555	parallel
Strand 3	E	599	602	parallel
Strand 4	E	498	500	parallel
Strand 5	E	621	623	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	581	583	first strand
Strand 2	E	593	595	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	628	631	first strand
Strand 2	E	647	650	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	347	350	anti-parallel
Strand 3	B	355	356	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	415	first strand
Strand 2	B	418	421	anti-parallel
Strand 3	B	426	428	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	527	first strand
Strand 2	B	552	555	parallel
Strand 3	B	599	602	parallel
Strand 4	B	498	500	parallel
Strand 5	B	621	623	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	581	583	first strand
Strand 2	B	593	595	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	629	631	first strand
Strand 2	B	648	650	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HWE

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWE