Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HWF entry

There are 7 chains in PDB entry 8HWF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	GLY 323	LEU 700
B	GLY 323	LEU 700
F	GLY 323	ILE 693
E	GLY 323	PRO 690
D	GLY 323	LEU 700
A	GLY 323	LEU 700
S	T 1	T 6

There are110 helices in PDB entry 8HWF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	324	336	Right-handed alpha
Helix 2	AA2	C	363	372	Right-handed alpha
Helix 3	AA3	C	373	375	Right-handed 310
Helix 4	AA4	C	376	381	Right-handed alpha
Helix 5	AA5	C	385	400	Right-handed alpha
Helix 6	AA6	C	429	434	Right-handed 310
Helix 7	AA7	C	455	469	Right-handed alpha
Helix 8	AA8	C	476	488	Right-handed alpha
Helix 9	AA9	C	489	491	Right-handed 310
Helix 10	AB1	C	508	521	Right-handed alpha
Helix 11	AB2	C	529	534	Right-handed alpha
Helix 12	AB3	C	541	546	Right-handed alpha
Helix 13	AB4	C	570	577	Right-handed alpha
Helix 14	AB5	C	614	619	Right-handed alpha
Helix 15	AB6	C	635	641	Right-handed alpha
Helix 16	AB7	C	656	661	Right-handed alpha
Helix 17	AB8	C	665	680	Right-handed alpha
Helix 18	AB9	C	693	700	Right-handed alpha
Helix 19	AC1	B	324	336	Right-handed alpha
Helix 20	AC2	B	363	371	Right-handed alpha
Helix 21	AC3	B	372	374	Right-handed 310
Helix 22	AC4	B	376	381	Right-handed alpha
Helix 23	AC5	B	382	384	Right-handed 310
Helix 24	AC6	B	385	400	Right-handed alpha
Helix 25	AC7	B	430	434	Right-handed 310
Helix 26	AC8	B	455	469	Right-handed alpha
Helix 27	AC9	B	476	488	Right-handed alpha
Helix 28	AD1	B	489	491	Right-handed 310
Helix 29	AD2	B	508	521	Right-handed alpha
Helix 30	AD3	B	528	532	Right-handed 310
Helix 31	AD4	B	541	546	Right-handed alpha
Helix 32	AD5	B	570	577	Right-handed alpha
Helix 33	AD6	B	614	619	Right-handed alpha
Helix 34	AD7	B	636	641	Right-handed 310
Helix 35	AD8	B	656	661	Right-handed alpha
Helix 36	AD9	B	665	680	Right-handed alpha
Helix 37	AE1	B	689	692	Right-handed 310
Helix 38	AE2	B	693	700	Right-handed alpha
Helix 39	AE3	F	324	335	Right-handed alpha
Helix 40	AE4	F	363	372	Right-handed alpha
Helix 41	AE5	F	373	375	Right-handed 310
Helix 42	AE6	F	376	381	Right-handed alpha
Helix 43	AE7	F	385	400	Right-handed alpha
Helix 44	AE8	F	429	434	Right-handed 310
Helix 45	AE9	F	447	451	Right-handed 310
Helix 46	AF1	F	455	469	Right-handed alpha
Helix 47	AF2	F	475	488	Right-handed alpha
Helix 48	AF3	F	489	491	Right-handed 310
Helix 49	AF4	F	508	520	Right-handed alpha
Helix 50	AF5	F	528	533	Right-handed 310
Helix 51	AF6	F	541	546	Right-handed alpha
Helix 52	AF7	F	570	578	Right-handed alpha
Helix 53	AF8	F	632	634	Right-handed 310
Helix 54	AF9	F	635	640	Right-handed alpha
Helix 55	AG1	F	652	661	Right-handed alpha
Helix 56	AG2	F	665	680	Right-handed alpha
Helix 57	AG3	E	324	335	Right-handed alpha
Helix 58	AG4	E	363	372	Right-handed alpha
Helix 59	AG5	E	373	375	Right-handed 310
Helix 60	AG6	E	376	381	Right-handed alpha
Helix 61	AG7	E	385	400	Right-handed alpha
Helix 62	AG8	E	429	434	Right-handed 310
Helix 63	AG9	E	455	469	Right-handed alpha
Helix 64	AH1	E	476	488	Right-handed alpha
Helix 65	AH2	E	508	521	Right-handed alpha
Helix 66	AH3	E	528	533	Right-handed 310
Helix 67	AH4	E	542	547	Right-handed alpha
Helix 68	AH5	E	570	577	Right-handed alpha
Helix 69	AH6	E	614	619	Right-handed alpha
Helix 70	AH7	E	635	641	Right-handed alpha
Helix 71	AH8	E	656	661	Right-handed alpha
Helix 72	AH9	E	665	680	Right-handed alpha
Helix 73	AI1	D	324	336	Right-handed alpha
Helix 74	AI2	D	363	371	Right-handed alpha
Helix 75	AI3	D	372	374	Right-handed 310
Helix 76	AI4	D	376	381	Right-handed alpha
Helix 77	AI5	D	385	398	Right-handed alpha
Helix 78	AI6	D	430	435	Right-handed alpha
Helix 79	AI7	D	455	469	Right-handed alpha
Helix 80	AI8	D	472	475	Right-handed 310
Helix 81	AI9	D	476	488	Right-handed alpha
Helix 82	AJ1	D	489	491	Right-handed 310
Helix 83	AJ2	D	508	521	Right-handed alpha
Helix 84	AJ3	D	541	546	Right-handed alpha
Helix 85	AJ4	D	570	577	Right-handed alpha
Helix 86	AJ5	D	617	621	Right-handed 310
Helix 87	AJ6	D	635	642	Right-handed alpha
Helix 88	AJ7	D	656	661	Right-handed alpha
Helix 89	AJ8	D	664	680	Right-handed alpha
Helix 90	AJ9	D	693	700	Right-handed alpha
Helix 91	AK1	A	325	336	Right-handed alpha
Helix 92	AK2	A	362	371	Right-handed alpha
Helix 93	AK3	A	372	375	Right-handed 310
Helix 94	AK4	A	376	381	Right-handed alpha
Helix 95	AK5	A	385	400	Right-handed alpha
Helix 96	AK6	A	429	434	Right-handed 310
Helix 97	AK7	A	455	469	Right-handed alpha
Helix 98	AK8	A	478	488	Right-handed alpha
Helix 99	AK9	A	489	491	Right-handed 310
Helix 100	AL1	A	508	521	Right-handed alpha
Helix 101	AL2	A	529	534	Right-handed alpha
Helix 102	AL3	A	541	546	Right-handed alpha
Helix 103	AL4	A	570	577	Right-handed alpha
Helix 104	AL5	A	617	619	Right-handed 310
Helix 105	AL6	A	633	635	Right-handed 310
Helix 106	AL7	A	636	641	Right-handed alpha
Helix 107	AL8	A	655	660	Right-handed alpha
Helix 108	AL9	A	664	680	Right-handed alpha
Helix 109	AM1	A	689	692	Right-handed 310
Helix 110	AM2	A	693	700	Right-handed alpha

There are 27 sheets in PDB entry 8HWF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	340	341	first strand
Strand 2	C	347	350	anti-parallel
Strand 3	C	355	356	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	415	first strand
Strand 2	C	418	421	anti-parallel
Strand 3	C	426	428	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	525	526	first strand
Strand 2	C	552	554	parallel
Strand 3	C	599	603	parallel
Strand 4	C	498	503	parallel
Strand 5	C	621	626	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	581	583	first strand
Strand 2	C	593	595	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	628	631	first strand
Strand 2	C	647	650	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	340	341	first strand
Strand 2	B	347	350	anti-parallel
Strand 3	B	355	356	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	415	first strand
Strand 2	B	418	421	anti-parallel
Strand 3	B	427	428	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	526	first strand
Strand 2	B	553	555	parallel
Strand 3	B	600	603	parallel
Strand 4	B	498	502	parallel
Strand 5	B	621	625	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	581	583	first strand
Strand 2	B	593	595	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	628	631	first strand
Strand 2	B	647	650	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	341	first strand
Strand 2	F	347	350	anti-parallel
Strand 3	F	355	357	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	414	first strand
Strand 2	F	419	421	anti-parallel
Strand 3	F	426	428	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	525	527	first strand
Strand 2	F	552	555	parallel
Strand 3	F	599	604	parallel
Strand 4	F	498	503	parallel
Strand 5	F	621	626	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	581	583	first strand
Strand 2	F	593	595	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	341	first strand
Strand 2	E	347	350	anti-parallel
Strand 3	E	355	357	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	415	first strand
Strand 2	E	418	421	anti-parallel
Strand 3	E	426	428	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	525	527	first strand
Strand 2	E	552	555	parallel
Strand 3	E	599	604	parallel
Strand 4	E	498	503	parallel
Strand 5	E	621	626	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	581	583	first strand
Strand 2	E	593	595	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	628	631	first strand
Strand 2	E	647	650	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	340	341	first strand
Strand 2	D	347	350	anti-parallel
Strand 3	D	355	356	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	415	first strand
Strand 2	D	418	421	anti-parallel
Strand 3	D	427	428	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	525	first strand
Strand 2	D	552	555	parallel
Strand 3	D	601	604	parallel
Strand 4	D	499	503	parallel
Strand 5	D	623	626	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	581	583	first strand
Strand 2	D	593	595	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	340	341	first strand
Strand 2	A	347	350	anti-parallel
Strand 3	A	355	356	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	415	first strand
Strand 2	A	418	421	anti-parallel
Strand 3	A	427	428	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	524	526	first strand
Strand 2	A	552	554	parallel
Strand 3	A	599	602	parallel
Strand 4	A	498	503	parallel
Strand 5	A	621	626	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	582	583	first strand
Strand 2	A	593	594	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HWF

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWF