Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HWH entry

There are 7 chains in PDB entry 8HWH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 323	LEU 700
B	GLY 323	LEU 700
C	GLY 323	LEU 700
D	GLY 323	LEU 700
E	GLY 323	THR 689
F	GLY 323	PRO 690
S	T 1	T 6

There are101 helices in PDB entry 8HWH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	327	336	Right-handed alpha
Helix 2	AA2	A	362	371	Right-handed alpha
Helix 3	AA3	A	372	375	Right-handed 310
Helix 4	AA4	A	376	381	Right-handed alpha
Helix 5	AA5	A	385	400	Right-handed alpha
Helix 6	AA6	A	429	434	Right-handed 310
Helix 7	AA7	A	455	469	Right-handed alpha
Helix 8	AA8	A	476	488	Right-handed alpha
Helix 9	AA9	A	508	521	Right-handed alpha
Helix 10	AB1	A	529	534	Right-handed alpha
Helix 11	AB2	A	541	546	Right-handed alpha
Helix 12	AB3	A	571	576	Right-handed alpha
Helix 13	AB4	A	614	618	Right-handed 310
Helix 14	AB5	A	656	660	Right-handed alpha
Helix 15	AB6	A	664	680	Right-handed alpha
Helix 16	AB7	A	689	692	Right-handed 310
Helix 17	AB8	A	693	700	Right-handed alpha
Helix 18	AB9	B	324	336	Right-handed alpha
Helix 19	AC1	B	363	371	Right-handed alpha
Helix 20	AC2	B	372	375	Right-handed 310
Helix 21	AC3	B	376	381	Right-handed alpha
Helix 22	AC4	B	382	387	Right-handed 310
Helix 23	AC5	B	388	400	Right-handed alpha
Helix 24	AC6	B	430	434	Right-handed 310
Helix 25	AC7	B	455	469	Right-handed alpha
Helix 26	AC8	B	476	488	Right-handed alpha
Helix 27	AC9	B	489	491	Right-handed 310
Helix 28	AD1	B	508	521	Right-handed alpha
Helix 29	AD2	B	541	546	Right-handed alpha
Helix 30	AD3	B	570	577	Right-handed alpha
Helix 31	AD4	B	656	661	Right-handed alpha
Helix 32	AD5	B	664	680	Right-handed alpha
Helix 33	AD6	B	689	692	Right-handed 310
Helix 34	AD7	B	693	700	Right-handed alpha
Helix 35	AD8	C	324	336	Right-handed alpha
Helix 36	AD9	C	363	371	Right-handed alpha
Helix 37	AE1	C	372	375	Right-handed 310
Helix 38	AE2	C	376	381	Right-handed alpha
Helix 39	AE3	C	382	384	Right-handed 310
Helix 40	AE4	C	385	400	Right-handed alpha
Helix 41	AE5	C	429	434	Right-handed 310
Helix 42	AE6	C	447	451	Right-handed 310
Helix 43	AE7	C	455	469	Right-handed alpha
Helix 44	AE8	C	475	488	Right-handed alpha
Helix 45	AE9	C	489	491	Right-handed 310
Helix 46	AF1	C	508	521	Right-handed alpha
Helix 47	AF2	C	529	534	Right-handed alpha
Helix 48	AF3	C	541	546	Right-handed alpha
Helix 49	AF4	C	570	577	Right-handed alpha
Helix 50	AF5	C	614	619	Right-handed alpha
Helix 51	AF6	C	656	661	Right-handed alpha
Helix 52	AF7	C	664	680	Right-handed alpha
Helix 53	AF8	C	693	700	Right-handed alpha
Helix 54	AF9	D	324	336	Right-handed alpha
Helix 55	AG1	D	363	371	Right-handed alpha
Helix 56	AG2	D	372	374	Right-handed 310
Helix 57	AG3	D	376	381	Right-handed alpha
Helix 58	AG4	D	385	397	Right-handed alpha
Helix 59	AG5	D	430	435	Right-handed alpha
Helix 60	AG6	D	455	469	Right-handed alpha
Helix 61	AG7	D	472	475	Right-handed 310
Helix 62	AG8	D	476	488	Right-handed alpha
Helix 63	AG9	D	508	521	Right-handed alpha
Helix 64	AH1	D	541	546	Right-handed alpha
Helix 65	AH2	D	570	577	Right-handed alpha
Helix 66	AH3	D	614	619	Right-handed alpha
Helix 67	AH4	D	656	661	Right-handed alpha
Helix 68	AH5	D	665	680	Right-handed alpha
Helix 69	AH6	D	693	700	Right-handed alpha
Helix 70	AH7	E	324	335	Right-handed alpha
Helix 71	AH8	E	363	372	Right-handed alpha
Helix 72	AH9	E	373	375	Right-handed 310
Helix 73	AI1	E	376	381	Right-handed alpha
Helix 74	AI2	E	387	400	Right-handed alpha
Helix 75	AI3	E	429	433	Right-handed 310
Helix 76	AI4	E	455	469	Right-handed alpha
Helix 77	AI5	E	475	488	Right-handed alpha
Helix 78	AI6	E	489	491	Right-handed 310
Helix 79	AI7	E	508	521	Right-handed alpha
Helix 80	AI8	E	528	533	Right-handed 310
Helix 81	AI9	E	541	548	Right-handed alpha
Helix 82	AJ1	E	570	577	Right-handed alpha
Helix 83	AJ2	E	614	619	Right-handed alpha
Helix 84	AJ3	E	657	661	Right-handed alpha
Helix 85	AJ4	E	665	680	Right-handed alpha
Helix 86	AJ5	F	324	336	Right-handed alpha
Helix 87	AJ6	F	363	372	Right-handed alpha
Helix 88	AJ7	F	373	375	Right-handed 310
Helix 89	AJ8	F	376	381	Right-handed alpha
Helix 90	AJ9	F	387	400	Right-handed alpha
Helix 91	AK1	F	429	434	Right-handed 310
Helix 92	AK2	F	447	451	Right-handed 310
Helix 93	AK3	F	455	469	Right-handed alpha
Helix 94	AK4	F	475	489	Right-handed alpha
Helix 95	AK5	F	508	520	Right-handed alpha
Helix 96	AK6	F	528	533	Right-handed 310
Helix 97	AK7	F	541	546	Right-handed alpha
Helix 98	AK8	F	571	578	Right-handed alpha
Helix 99	AK9	F	614	619	Right-handed alpha
Helix 100	AL1	F	656	661	Right-handed alpha
Helix 101	AL2	F	665	680	Right-handed alpha

There are 23 sheets in PDB entry 8HWH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	340	341	first strand
Strand 2	A	347	350	anti-parallel
Strand 3	A	355	357	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	415	first strand
Strand 2	A	418	421	anti-parallel
Strand 3	A	427	428	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	601	602	first strand
Strand 2	A	499	503	parallel
Strand 3	A	622	626	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	524	526	first strand
Strand 2	A	552	554	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	582	583	first strand
Strand 2	A	593	594	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	340	341	first strand
Strand 2	B	347	350	anti-parallel
Strand 3	B	355	356	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	415	first strand
Strand 2	B	418	421	anti-parallel
Strand 3	B	427	428	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	526	first strand
Strand 2	B	553	555	parallel
Strand 3	B	600	603	parallel
Strand 4	B	498	503	parallel
Strand 5	B	621	626	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	581	583	first strand
Strand 2	B	593	595	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	340	341	first strand
Strand 2	C	347	350	anti-parallel
Strand 3	C	355	356	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	415	first strand
Strand 2	C	418	421	anti-parallel
Strand 3	C	426	428	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	525	526	first strand
Strand 2	C	552	554	parallel
Strand 3	C	599	602	parallel
Strand 4	C	498	503	parallel
Strand 5	C	621	626	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	581	583	first strand
Strand 2	C	593	595	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	349	350	first strand
Strand 2	D	355	356	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	415	first strand
Strand 2	D	418	421	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	526	first strand
Strand 2	D	552	555	parallel
Strand 3	D	601	604	parallel
Strand 4	D	499	503	parallel
Strand 5	D	623	626	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	581	583	first strand
Strand 2	D	593	595	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	341	first strand
Strand 2	E	347	351	anti-parallel
Strand 3	E	354	357	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	414	first strand
Strand 2	E	419	421	anti-parallel
Strand 3	E	426	428	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	525	527	first strand
Strand 2	E	552	555	parallel
Strand 3	E	599	604	parallel
Strand 4	E	498	503	parallel
Strand 5	E	621	626	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	340	341	first strand
Strand 2	F	347	350	anti-parallel
Strand 3	F	355	357	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	414	first strand
Strand 2	F	419	421	anti-parallel
Strand 3	F	426	428	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	525	527	first strand
Strand 2	F	552	555	parallel
Strand 3	F	599	604	parallel
Strand 4	F	498	502	parallel
Strand 5	F	621	625	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HWH

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWH