Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HWQ entry

There are 7 chains in PDB entry 8HWQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	SER 2	PRO 377
A	SER 2	PRO 377
B	SER 2	PRO 377
C	SER 2	PRO 377
D	SER 2	PRO 377
E	SER 2	PRO 377
G	SER 2	PRO 377

There are135 helices in PDB entry 8HWQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	2	11	Right-handed alpha
Helix 2	AA2	F	32	54	Right-handed alpha
Helix 3	AA3	F	73	83	Right-handed alpha
Helix 4	AA4	F	104	122	Right-handed alpha
Helix 5	AA5	F	122	132	Right-handed alpha
Helix 6	AA6	F	132	148	Right-handed alpha
Helix 7	AA7	F	159	168	Right-handed alpha
Helix 8	AA8	F	169	174	Right-handed alpha
Helix 9	AA9	F	177	183	Right-handed alpha
Helix 10	AB1	F	191	201	Right-handed alpha
Helix 11	AB2	F	204	230	Right-handed alpha
Helix 12	AB3	F	265	282	Right-handed alpha
Helix 13	AB4	F	282	296	Right-handed alpha
Helix 14	AB5	F	301	308	Right-handed alpha
Helix 15	AB6	F	308	317	Right-handed alpha
Helix 16	AB7	F	324	335	Right-handed alpha
Helix 17	AB8	F	345	349	Right-handed 310
Helix 18	AB9	F	361	367	Right-handed alpha
Helix 19	AC1	F	369	374	Right-handed alpha
Helix 20	AC2	A	3	11	Right-handed alpha
Helix 21	AC3	A	32	54	Right-handed alpha
Helix 22	AC4	A	73	83	Right-handed alpha
Helix 23	AC5	A	104	122	Right-handed alpha
Helix 24	AC6	A	122	132	Right-handed alpha
Helix 25	AC7	A	132	148	Right-handed alpha
Helix 26	AC8	A	149	151	Right-handed 310
Helix 27	AC9	A	159	168	Right-handed alpha
Helix 28	AD1	A	169	174	Right-handed alpha
Helix 29	AD2	A	177	183	Right-handed alpha
Helix 30	AD3	A	191	201	Right-handed alpha
Helix 31	AD4	A	204	230	Right-handed alpha
Helix 32	AD5	A	265	282	Right-handed alpha
Helix 33	AD6	A	282	296	Right-handed alpha
Helix 34	AD7	A	301	308	Right-handed alpha
Helix 35	AD8	A	308	317	Right-handed alpha
Helix 36	AD9	A	324	335	Right-handed alpha
Helix 37	AE1	A	345	349	Right-handed 310
Helix 38	AE2	A	361	367	Right-handed alpha
Helix 39	AE3	A	369	374	Right-handed alpha
Helix 40	AE4	B	3	11	Right-handed alpha
Helix 41	AE5	B	32	54	Right-handed alpha
Helix 42	AE6	B	73	83	Right-handed alpha
Helix 43	AE7	B	104	122	Right-handed alpha
Helix 44	AE8	B	122	132	Right-handed alpha
Helix 45	AE9	B	132	148	Right-handed alpha
Helix 46	AF1	B	149	151	Right-handed 310
Helix 47	AF2	B	159	168	Right-handed alpha
Helix 48	AF3	B	169	174	Right-handed alpha
Helix 49	AF4	B	177	183	Right-handed alpha
Helix 50	AF5	B	191	201	Right-handed alpha
Helix 51	AF6	B	204	230	Right-handed alpha
Helix 52	AF7	B	265	282	Right-handed alpha
Helix 53	AF8	B	282	296	Right-handed alpha
Helix 54	AF9	B	301	308	Right-handed alpha
Helix 55	AG1	B	308	317	Right-handed alpha
Helix 56	AG2	B	324	335	Right-handed alpha
Helix 57	AG3	B	345	349	Right-handed 310
Helix 58	AG4	B	361	367	Right-handed alpha
Helix 59	AG5	B	369	374	Right-handed alpha
Helix 60	AG6	C	3	11	Right-handed alpha
Helix 61	AG7	C	32	54	Right-handed alpha
Helix 62	AG8	C	73	83	Right-handed alpha
Helix 63	AG9	C	104	122	Right-handed alpha
Helix 64	AH1	C	122	132	Right-handed alpha
Helix 65	AH2	C	132	148	Right-handed alpha
Helix 66	AH3	C	159	168	Right-handed alpha
Helix 67	AH4	C	169	174	Right-handed alpha
Helix 68	AH5	C	177	183	Right-handed alpha
Helix 69	AH6	C	191	201	Right-handed alpha
Helix 70	AH7	C	204	230	Right-handed alpha
Helix 71	AH8	C	265	282	Right-handed alpha
Helix 72	AH9	C	282	296	Right-handed alpha
Helix 73	AI1	C	301	308	Right-handed alpha
Helix 74	AI2	C	308	317	Right-handed alpha
Helix 75	AI3	C	324	335	Right-handed alpha
Helix 76	AI4	C	345	349	Right-handed 310
Helix 77	AI5	C	361	367	Right-handed alpha
Helix 78	AI6	C	369	374	Right-handed alpha
Helix 79	AI7	D	3	11	Right-handed alpha
Helix 80	AI8	D	32	54	Right-handed alpha
Helix 81	AI9	D	73	83	Right-handed alpha
Helix 82	AJ1	D	104	122	Right-handed alpha
Helix 83	AJ2	D	122	132	Right-handed alpha
Helix 84	AJ3	D	132	148	Right-handed alpha
Helix 85	AJ4	D	159	168	Right-handed alpha
Helix 86	AJ5	D	169	174	Right-handed alpha
Helix 87	AJ6	D	177	183	Right-handed alpha
Helix 88	AJ7	D	191	201	Right-handed alpha
Helix 89	AJ8	D	204	230	Right-handed alpha
Helix 90	AJ9	D	265	282	Right-handed alpha
Helix 91	AK1	D	282	296	Right-handed alpha
Helix 92	AK2	D	301	308	Right-handed alpha
Helix 93	AK3	D	308	317	Right-handed alpha
Helix 94	AK4	D	324	335	Right-handed alpha
Helix 95	AK5	D	345	349	Right-handed 310
Helix 96	AK6	D	361	367	Right-handed alpha
Helix 97	AK7	D	369	374	Right-handed alpha
Helix 98	AK8	E	3	11	Right-handed alpha
Helix 99	AK9	E	32	54	Right-handed alpha
Helix 100	AL1	E	73	83	Right-handed alpha
Helix 101	AL2	E	104	122	Right-handed alpha
Helix 102	AL3	E	122	132	Right-handed alpha
Helix 103	AL4	E	132	148	Right-handed alpha
Helix 104	AL5	E	149	151	Right-handed 310
Helix 105	AL6	E	159	168	Right-handed alpha
Helix 106	AL7	E	169	174	Right-handed alpha
Helix 107	AL8	E	177	183	Right-handed alpha
Helix 108	AL9	E	191	201	Right-handed alpha
Helix 109	AM1	E	204	230	Right-handed alpha
Helix 110	AM2	E	265	296	Right-handed alpha
Helix 111	AM3	E	301	308	Right-handed alpha
Helix 112	AM4	E	308	317	Right-handed alpha
Helix 113	AM5	E	324	335	Right-handed alpha
Helix 114	AM6	E	345	349	Right-handed 310
Helix 115	AM7	E	361	367	Right-handed alpha
Helix 116	AM8	E	369	374	Right-handed alpha
Helix 117	AM9	G	3	11	Right-handed alpha
Helix 118	AN1	G	32	54	Right-handed alpha
Helix 119	AN2	G	73	83	Right-handed alpha
Helix 120	AN3	G	104	122	Right-handed alpha
Helix 121	AN4	G	122	132	Right-handed alpha
Helix 122	AN5	G	132	148	Right-handed alpha
Helix 123	AN6	G	159	168	Right-handed alpha
Helix 124	AN7	G	169	174	Right-handed alpha
Helix 125	AN8	G	177	183	Right-handed alpha
Helix 126	AN9	G	191	201	Right-handed alpha
Helix 127	AO1	G	204	230	Right-handed alpha
Helix 128	AO2	G	265	282	Right-handed alpha
Helix 129	AO3	G	282	296	Right-handed alpha
Helix 130	AO4	G	301	308	Right-handed alpha
Helix 131	AO5	G	308	317	Right-handed alpha
Helix 132	AO6	G	324	335	Right-handed alpha
Helix 133	AO7	G	345	349	Right-handed 310
Helix 134	AO8	G	361	367	Right-handed alpha
Helix 135	AO9	G	369	374	Right-handed alpha

There are 14 sheets in PDB entry 8HWQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	66	first strand
Strand 2	F	261	263	anti-parallel
Strand 3	F	239	240	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	89	91	first strand
Strand 2	F	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	66	first strand
Strand 2	A	258	263	anti-parallel
Strand 3	A	239	242	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	91	first strand
Strand 2	A	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	66	first strand
Strand 2	B	258	263	anti-parallel
Strand 3	B	239	242	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	91	first strand
Strand 2	B	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	66	first strand
Strand 2	C	261	263	anti-parallel
Strand 3	C	239	240	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	91	first strand
Strand 2	C	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	66	first strand
Strand 2	D	261	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	91	first strand
Strand 2	D	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	66	first strand
Strand 2	E	258	263	anti-parallel
Strand 3	E	239	242	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	89	91	first strand
Strand 2	E	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	64	66	first strand
Strand 2	G	261	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	89	91	first strand
Strand 2	G	101	103	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HWQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HWQ