Analysis of interatomic Contacts of Structural Units in PDB entry:
8HXE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HXE entry

There are 2 chains in PDB entry 8HXE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2GLY 267
B
 GLU 2GLY 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8HXE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 58Right-handed 310
Helix 2
AA2
A
59 70Right-handed alpha
Helix 3
AA3
A
73 75Right-handed 310
Helix 4
AA4
A
86 91Right-handed alpha
Helix 5
AA5
A
92 100Right-handed alpha
Helix 6
AA6
A
108 116Right-handed alpha
Helix 7
AA7
A
201 216Right-handed alpha
Helix 8
AA8
A
225 230Right-handed 310
Helix 9
AA9
A
235 239Right-handed 310
Helix 10
AB1
A
245 265Right-handed alpha
Helix 11
AB2
B
56 58Right-handed 310
Helix 12
AB3
B
59 70Right-handed alpha
Helix 13
AB4
B
73 75Right-handed 310
Helix 14
AB5
B
86 91Right-handed alpha
Helix 15
AB6
B
92 100Right-handed alpha
Helix 16
AB7
B
108 116Right-handed alpha
Helix 17
AB8
B
201 215Right-handed alpha
Helix 18
AB9
B
225 230Right-handed 310
Helix 19
AC1
B
232 239Right-handed 310
Helix 20
AC2
B
245 265Right-handed alpha
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There are 4 sheets in PDB entry 8HXE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
30 32anti-parallel
Strand 3
A
41 44anti-parallel
Strand 4
A
49 52anti-parallel
Strand 5
A
77 81parallel
Strand 6
A
103 107parallel
Strand 7
A
137 139parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 147first strand
Strand 2
A
150 156anti-parallel
Strand 3
A
165 171anti-parallel
Strand 4
A
178 182anti-parallel
Strand 5
A
220 222parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 25first strand
Strand 2
B
30 32anti-parallel
Strand 3
B
41 45anti-parallel
Strand 4
B
48 52anti-parallel
Strand 5
B
77 81parallel
Strand 6
B
103 107parallel
Strand 7
B
137 139parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 147first strand
Strand 2
B
150 156anti-parallel
Strand 3
B
165 173anti-parallel
Strand 4
B
176 182anti-parallel
Strand 5
B
220 222parallel
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