Analysis of interatomic Contacts of Structural Units in PDB entry:
8HXJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HXJ entry

There are 3 chains in PDB entry 8HXJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	GLU 1146
B	GLN 14	GLU 1146
C	GLN 14	GLU 1146

There are 78 helices in PDB entry 8HXJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	337	342	Right-handed alpha
Helix 3	AA3	A	349	353	Right-handed 310
Helix 4	AA4	A	364	368	Right-handed 310
Helix 5	AA5	A	384	388	Right-handed 310
Helix 6	AA6	A	405	410	Right-handed 310
Helix 7	AA7	A	416	422	Right-handed alpha
Helix 8	AA8	A	619	625	Right-handed alpha
Helix 9	AA9	A	626	629	Right-handed 310
Helix 10	AB1	A	630	636	Right-handed alpha
Helix 11	AB2	A	676	680	Right-handed 310
Helix 12	AB3	A	734	739	Right-handed alpha
Helix 13	AB4	A	742	753	Right-handed alpha
Helix 14	AB5	A	755	778	Right-handed alpha
Helix 15	AB6	A	814	822	Right-handed alpha
Helix 16	AB7	A	832	838	Right-handed alpha
Helix 17	AB8	A	844	852	Right-handed alpha
Helix 18	AB9	A	862	880	Right-handed alpha
Helix 19	AC1	A	882	886	Right-handed 310
Helix 20	AC2	A	893	906	Right-handed alpha
Helix 21	AC3	A	916	938	Right-handed alpha
Helix 22	AC4	A	942	961	Right-handed alpha
Helix 23	AC5	A	962	964	Right-handed 310
Helix 24	AC6	A	972	980	Right-handed alpha
Helix 25	AC7	A	981	1029	Right-handed alpha
Helix 26	AC8	A	1138	1145	Right-handed alpha
Helix 27	AC9	B	294	304	Right-handed alpha
Helix 28	AD1	B	337	343	Right-handed alpha
Helix 29	AD2	B	349	353	Right-handed 310
Helix 30	AD3	B	364	368	Right-handed 310
Helix 31	AD4	B	384	388	Right-handed 310
Helix 32	AD5	B	405	410	Right-handed 310
Helix 33	AD6	B	416	422	Right-handed alpha
Helix 34	AD7	B	619	625	Right-handed alpha
Helix 35	AD8	B	626	629	Right-handed 310
Helix 36	AD9	B	630	636	Right-handed alpha
Helix 37	AE1	B	676	681	Right-handed alpha
Helix 38	AE2	B	733	740	Right-handed alpha
Helix 39	AE3	B	742	753	Right-handed alpha
Helix 40	AE4	B	755	778	Right-handed alpha
Helix 41	AE5	B	813	822	Right-handed alpha
Helix 42	AE6	B	832	838	Right-handed alpha
Helix 43	AE7	B	844	852	Right-handed alpha
Helix 44	AE8	B	862	880	Right-handed alpha
Helix 45	AE9	B	882	886	Right-handed 310
Helix 46	AF1	B	893	906	Right-handed alpha
Helix 47	AF2	B	916	938	Right-handed alpha
Helix 48	AF3	B	942	961	Right-handed alpha
Helix 49	AF4	B	962	964	Right-handed 310
Helix 50	AF5	B	972	980	Right-handed alpha
Helix 51	AF6	B	981	1029	Right-handed alpha
Helix 52	AF7	B	1121	1125	Right-handed 310
Helix 53	AF8	B	1138	1145	Right-handed alpha
Helix 54	AF9	C	294	304	Right-handed alpha
Helix 55	AG1	C	337	343	Right-handed alpha
Helix 56	AG2	C	349	353	Right-handed 310
Helix 57	AG3	C	364	368	Right-handed 310
Helix 58	AG4	C	384	388	Right-handed 310
Helix 59	AG5	C	405	410	Right-handed 310
Helix 60	AG6	C	416	422	Right-handed alpha
Helix 61	AG7	C	619	625	Right-handed alpha
Helix 62	AG8	C	626	629	Right-handed 310
Helix 63	AG9	C	630	636	Right-handed alpha
Helix 64	AH1	C	734	739	Right-handed alpha
Helix 65	AH2	C	742	753	Right-handed alpha
Helix 66	AH3	C	755	778	Right-handed alpha
Helix 67	AH4	C	811	822	Right-handed alpha
Helix 68	AH5	C	832	838	Right-handed alpha
Helix 69	AH6	C	844	852	Right-handed alpha
Helix 70	AH7	C	862	880	Right-handed alpha
Helix 71	AH8	C	882	886	Right-handed 310
Helix 72	AH9	C	893	905	Right-handed alpha
Helix 73	AI1	C	916	938	Right-handed alpha
Helix 74	AI2	C	942	961	Right-handed alpha
Helix 75	AI3	C	962	964	Right-handed 310
Helix 76	AI4	C	972	980	Right-handed alpha
Helix 77	AI5	C	981	1029	Right-handed alpha
Helix 78	AI6	C	1138	1144	Right-handed alpha

There are 50 sheets in PDB entry 8HXJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	31	first strand
Strand 2	A	60	65	anti-parallel
Strand 3	A	265	269	anti-parallel
Strand 4	A	90	94	anti-parallel
Strand 5	A	189	197	anti-parallel
Strand 6	A	200	208	anti-parallel
Strand 7	A	222	230	anti-parallel
Strand 8	A	36	37	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	271	272	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	242	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	117	120	anti-parallel
Strand 5	A	126	129	anti-parallel
Strand 6	A	169	172	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	278	279	first strand
Strand 2	A	285	287	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	314	first strand
Strand 2	A	596	600	anti-parallel
Strand 3	A	609	611	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	327	first strand
Strand 2	A	538	543	parallel
Strand 3	A	546	554	anti-parallel
Strand 4	A	585	588	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	358	first strand
Strand 2	A	395	396	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	379	first strand
Strand 2	A	431	437	anti-parallel
Strand 3	A	507	514	anti-parallel
Strand 4	A	399	403	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	565	567	first strand
Strand 2	A	573	576	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	687	692	parallel
Strand 3	A	670	675	anti-parallel
Strand 4	A	664	665	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	697	699	first strand
Strand 2	B	783	785	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	708	714	first strand
Strand 2	A	1065	1074	anti-parallel
Strand 3	A	1090	1093	anti-parallel
Strand 4	A	1099	1101	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	717	724	first strand
Strand 2	A	1055	1062	anti-parallel
Strand 3	A	1044	1052	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	730	731	first strand
Strand 2	A	855	856	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	783	785	first strand
Strand 2	C	697	699	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1085	1086	first strand
Strand 2	A	1116	1117	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	60	65	anti-parallel
Strand 3	B	265	269	anti-parallel
Strand 4	B	90	94	anti-parallel
Strand 5	B	189	197	anti-parallel
Strand 6	B	200	208	anti-parallel
Strand 7	B	222	230	anti-parallel
Strand 8	B	36	37	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	271	272	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	242	anti-parallel
Strand 3	B	101	107	anti-parallel
Strand 4	B	116	120	anti-parallel
Strand 5	B	126	129	anti-parallel
Strand 6	B	169	172	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	278	279	first strand
Strand 2	B	285	287	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	310	314	first strand
Strand 2	B	596	600	anti-parallel
Strand 3	B	609	611	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	327	first strand
Strand 2	B	538	543	parallel
Strand 3	B	546	554	anti-parallel
Strand 4	B	585	588	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	358	first strand
Strand 2	B	395	396	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	379	first strand
Strand 2	B	432	437	anti-parallel
Strand 3	B	507	513	anti-parallel
Strand 4	B	399	403	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	565	567	first strand
Strand 2	B	573	576	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	687	692	parallel
Strand 3	B	670	675	anti-parallel
Strand 4	B	664	665	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	697	699	first strand
Strand 2	C	783	785	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	714	first strand
Strand 2	B	1065	1071	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	717	724	first strand
Strand 2	B	1055	1062	anti-parallel
Strand 3	B	1044	1051	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	730	731	first strand
Strand 2	B	855	856	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1085	1086	first strand
Strand 2	B	1116	1117	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1090	1093	first strand
Strand 2	B	1098	1101	anti-parallel
Strand 3	B	1109	1110	anti-parallel

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There are 8 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	31	first strand
Strand 2	C	60	65	anti-parallel
Strand 3	C	265	269	anti-parallel
Strand 4	C	90	94	anti-parallel
Strand 5	C	189	197	anti-parallel
Strand 6	C	200	208	anti-parallel
Strand 7	C	222	230	anti-parallel
Strand 8	C	36	37	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	271	272	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	242	anti-parallel
Strand 3	C	101	107	anti-parallel
Strand 4	C	116	120	anti-parallel
Strand 5	C	126	129	anti-parallel
Strand 6	C	169	172	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	278	279	first strand
Strand 2	C	285	287	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	310	314	first strand
Strand 2	C	596	600	anti-parallel
Strand 3	C	609	611	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	327	first strand
Strand 2	C	538	543	parallel
Strand 3	C	546	554	anti-parallel
Strand 4	C	585	588	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	358	first strand
Strand 2	C	395	396	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	379	first strand
Strand 2	C	431	437	anti-parallel
Strand 3	C	507	514	anti-parallel
Strand 4	C	399	403	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	565	567	first strand
Strand 2	C	573	576	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	687	690	parallel
Strand 3	C	671	675	anti-parallel
Strand 4	C	664	665	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	708	714	first strand
Strand 2	C	1065	1071	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	717	724	first strand
Strand 2	C	1055	1062	anti-parallel
Strand 3	C	1044	1050	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	730	731	first strand
Strand 2	C	855	856	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1085	1086	first strand
Strand 2	C	1116	1117	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1090	1092	first strand
Strand 2	C	1099	1101	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HXJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HXJ